BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0033.0006.p         (119 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

HI0032 [M] COG0768 Cell division protein FtsI/penicillin-binding...    88   4e-18
PM1924 [M] COG0768 Cell division protein FtsI/penicillin-binding...    84   7e-17
RSc0062 [M] COG0768 Cell division protein FtsI/penicillin-bindin...    80   1e-15
PA4003 [M] COG0768 Cell division protein FtsI/penicillin-binding...    80   1e-15
XF1312 [M] COG0768 Cell division protein FtsI/penicillin-binding...    78   4e-15

>HI0032 [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
           Hin Haemophilus influenzae
          Length = 651

 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 3/87 (3%)

Query: 8   RVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIV 67
           + FA A Y  AGKSGTAQV S+K+NEKY+   L   L D+A FTA+AP D P++ ++VI+
Sbjct: 540 KAFADANYRVAGKSGTAQVFSLKENEKYNTAGLKKELHDHAWFTAYAPYDNPKLVVTVIL 599

Query: 68  EX---GAEAAAPLARKAIDFYLLGKRP 91
           E    G+  AAPLARK +D+YL  + P
Sbjct: 600 ENAGGGSSNAAPLARKVMDYYLNQRLP 626


>PM1924 [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
           Pmu Pasteurella multocida
          Length = 644

 Score = 84.3 bits (207), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)

Query: 8   RVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIV 67
           + F G  Y  AGKSGTAQV S+K+N+ YDA  L   L D+A FTA+AP D P++ +++I+
Sbjct: 541 KAFIGTSYRVAGKSGTAQVFSLKENQTYDASGLKKELHDHAWFTAYAPYDDPKMVVAIIL 600

Query: 68  EX---GAEAAAPLARKAIDFYLLGKRP 91
           E    G+  AAP+ R+ +D+YL  + P
Sbjct: 601 ENAGGGSSVAAPVVRQIMDYYLTQRLP 627


>RSc0062 [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
           Rso Ralstonia solanacearum
          Length = 801

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 3/88 (3%)

Query: 16  TSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIVEX---GAE 72
            +AGK+GTAQV S+ K EKY+   +  +  D+ALF AFAP D P+IA+++IVE    GA 
Sbjct: 553 AAAGKTGTAQVFSLGKGEKYNHHAIPEYKRDHALFEAFAPTDHPKIAVALIVENAGFGAT 612

Query: 73  AAAPLARKAIDFYLLGKRPGDKAKAAAK 100
           +AAP+AR   D+YL GK P + A  A K
Sbjct: 613 SAAPIARAVFDYYLQGKWPAELAAIAPK 640


>PA4003 [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
           Pae Pseudomonas aeruginosa
          Length = 646

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 3/94 (3%)

Query: 8   RVFAGAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIV 67
           +V A + Y  AGKSGTAQVV+IK+NE+YD  +L     D+ALF  FAPA+ P+IA++V+V
Sbjct: 526 KVGATSAYLIAGKSGTAQVVAIKQNERYDRSKLLERHRDHALFVGFAPANNPQIAVAVMV 585

Query: 68  ---EXGAEAAAPLARKAIDFYLLGKRPGDKAKAA 98
              E G+  AAP+ ++ +D +LL +    KA+ A
Sbjct: 586 ENGESGSGVAAPVVKQVMDAWLLDEHGKLKAEYA 619


>XF1312 [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
           Xfa Xylella fastidiosa 9a5c
          Length = 694

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 52/83 (62%), Gaps = 3/83 (3%)

Query: 12  GAEYTSAGKSGTAQVVSIKKNEKYDAKRLATHLLDNALFTAFAPADKPRIALSVIVE--- 68
           GA Y+ AGK+GTAQV S K     D + L  HL   ALF  FAPAD P IA++V VE   
Sbjct: 538 GAPYSIAGKTGTAQVASRKGEAAVDPRNLPMHLRHRALFVGFAPADNPTIAVAVAVEGGG 597

Query: 69  XGAEAAAPLARKAIDFYLLGKRP 91
            GA  AAP+ARK  D +LLGK P
Sbjct: 598 YGASTAAPIARKIFDAWLLGKLP 620