BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0116.p         (93 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA5109 [S] COG3803 Uncharacterized protein conserved in bacteria...   105   2e-23
BMEI0803 [S] COG3803 Uncharacterized protein conserved in bacter...    90   1e-18
RSc2089 [S] COG3803 Uncharacterized protein conserved in bacteri...    83   2e-16
SMc04178 [S] COG3803 Uncharacterized protein conserved in bacter...    76   2e-14
CC2122 Non COG                                                         73   2e-13

>PA5109 [S] COG3803 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 200

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 3/93 (3%)

Query: 1   LSPLQRVFFYLPLEHSEDIDDQEHCVQLFRALAKQMAKDDPASRETFDGYLKFADRHHAI 60
           L P++RVF YL LEH+ED+  QE  V  FR L  Q+     + R+ FD +  +A+RHHA+
Sbjct: 111 LPPVRRVFAYLVLEHAEDLPSQERAVACFRDLRDQVGG---SVRKPFDDFYDYAERHHAV 167

Query: 61  IARFGRFPHRNAILGRASTAEEIAFLKEPHSSF 93
           +ARFGRFPHRNAILGR S+ EE AFL+EP S F
Sbjct: 168 VARFGRFPHRNAILGRPSSEEETAFLREPGSRF 200


>BMEI0803 [S] COG3803 Uncharacterized protein conserved in bacteria Bme
           Brucella melitensis
          Length = 208

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 14/93 (15%)

Query: 1   LSPLQRVFFYLPLEHSEDIDDQEHCVQLFRALAKQMAKDDPASRETFDGYLKFADRHHAI 60
           LSP QR FFYLP  HSE+++DQ+ CV L+  L  + A D             FA +HH I
Sbjct: 130 LSPEQRQFFYLPFMHSENLNDQKRCVDLYEKLGDEFASD-------------FARQHHDI 176

Query: 61  IARFGRFPHRNAILGRASTAEEIAFLKEPHSSF 93
           I RFGRFPHRN +LGR +T EE  FLK+ H+ F
Sbjct: 177 IERFGRFPHRNQVLGRDTTPEEAEFLKD-HAGF 208


>RSc2089 [S] COG3803 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 192

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 53/88 (60%), Gaps = 9/88 (10%)

Query: 6   RVFFYLPLEHSEDIDDQEHCVQLFRALAKQMAKDDPASRETFDGYLKFADRHHAIIARFG 65
           R+F YLP EHSE +  Q+  ++LF  L  Q    D          L +A RH  IIARFG
Sbjct: 114 RMFCYLPFEHSEALAAQDESIRLFTRLRDQEGDAD---------SLMWAHRHRDIIARFG 164

Query: 66  RFPHRNAILGRASTAEEIAFLKEPHSSF 93
           RFPHRNA LGRAST EEI FL  P +SF
Sbjct: 165 RFPHRNAALGRASTPEEIGFLSLPGASF 192


>SMc04178 [S] COG3803 Uncharacterized protein conserved in bacteria Sme
           Sinorhizobium meliloti
          Length = 239

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 13/88 (14%)

Query: 6   RVFFYLPLEHSEDIDDQEHCVQLFRALAKQMAKDDPASRETFDGYLKFADRHHAIIARFG 65
           R FFY+P EHSE++ DQ   V+LF  L                 YL +A RH  ++ RFG
Sbjct: 165 RAFFYMPFEHSENLTDQTMSVKLFTELGDA-------------SYLDYAIRHRDVMERFG 211

Query: 66  RFPHRNAILGRASTAEEIAFLKEPHSSF 93
           RFPHRN IL R S+A E  +L +P + F
Sbjct: 212 RFPHRNGILARMSSAAEEEYLAQPGAGF 239


>CC2122 Non COG
          Length = 187

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 10/87 (11%)

Query: 3   PLQ-RVFFYLPLEHSEDIDDQEHCVQLFRALAKQMAKDDPASRETFDGYLKFADRHHAII 61
           PL+ R FFYLP EHSE + DQE  VQLF  L     + D    E+    +K+A  H  +I
Sbjct: 105 PLELRRFFYLPFEHSESLVDQEFSVQLFATL-----QADTGDEES----MKYALVHRDVI 155

Query: 62  ARFGRFPHRNAILGRASTAEEIAFLKE 88
           ARFGRFPHRN  LGR +T  E  FL E
Sbjct: 156 ARFGRFPHRNPGLGRETTEAEQEFLDE 182