BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0102.p         (78 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0874_3 [E] COG0411 ABC-type branched-chain amino acid trans...    89   3e-18
AGc4398 [E] COG0411 ABC-type branched-chain amino acid transport...    84   1e-16
BMEII0099 [E] COG0411 ABC-type branched-chain amino acid transpo...    80   8e-16
BMEI0260_1 [E] COG0411 ABC-type branched-chain amino acid transp...    80   1e-15
SMc01949 [E] COG0411 ABC-type branched-chain amino acid transpor...    76   2e-14

>BMEII0874_3 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 271

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 58/78 (74%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           +DEVMAG+N T+VR  +D++L IRD G+S + +EHV++ +M ++++++VL  G+ IA G 
Sbjct: 188 LDEVMAGINQTDVRRAIDLMLSIRDSGVSIIAIEHVMQAVMSLSDRVIVLASGEVIAQGR 247

Query: 61  PHDVSNDPHVIAAYLGDE 78
           P DV  DP V+ AYLG E
Sbjct: 248 PQDVVRDPQVVEAYLGKE 265


>AGc4398 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 297

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 55/78 (70%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           +DE  AGLNP E      ++  IRD+G S L++EH +  +M I++ +VVL+YG+KI+DGS
Sbjct: 203 LDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEYGQKISDGS 262

Query: 61  PHDVSNDPHVIAAYLGDE 78
           P  V NDP VIAAYLG E
Sbjct: 263 PDHVKNDPKVIAAYLGVE 280


>BMEII0099 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 205

 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 59/77 (76%)

Query: 2   DEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGSP 61
           DEVMAGLN  E+ E ++V+ K+RD G++ L++EHV++ I  ++++++VL +G+KIA+GS 
Sbjct: 127 DEVMAGLNLVELEEVIEVIRKVRDSGVTILVIEHVMKAIKSLSDRLMVLHHGEKIAEGST 186

Query: 62  HDVSNDPHVIAAYLGDE 78
             V ++P VI AYLG +
Sbjct: 187 DAVLSNPVVIKAYLGKK 203


>BMEI0260_1 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 280

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQ-GISCLIVEHVLEGIMPIANQIVVLDYGKKIADG 59
           +DE  AGLNP E  E   ++L IR + G S L++EH +  +M I++ ++VL+YG KI+DG
Sbjct: 197 LDEPAAGLNPRESAELNTLLLDIRKETGTSILLIEHDMSVVMEISDHVIVLEYGTKISDG 256

Query: 60  SPHDVSNDPHVIAAYLG 76
           +P +V NDP VIAAYLG
Sbjct: 257 APEEVKNDPRVIAAYLG 273


>SMc01949 [E] COG0411 ABC-type branched-chain amino acid transport systems,
           ATPase component Sme Sinorhizobium meliloti
          Length = 295

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIR-DQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADG 59
           +DE  AGLNP E      ++ +IR D G S L++EH +  +M I++ +VVL+YG+KI+DG
Sbjct: 194 LDEPAAGLNPRESLALNALLQEIRRDTGTSILLIEHDMSVVMEISDHVVVLEYGQKISDG 253

Query: 60  SPHDVSNDPHVIAAYL 75
           +P  V NDP VIAAYL
Sbjct: 254 NPDFVKNDPRVIAAYL 269