BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0053.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0810 [O] COG0425 Predicted redox protein, regulator of disulf...   117   4e-27
BS_yrkI [O] COG0425 Predicted redox protein, regulator of disulf...    77   1e-14
BS_yrkF_1 [O] COG0425 Predicted redox protein, regulator of disu...    75   2e-14
PA1006 [O] COG0425 Predicted redox protein, regulator of disulfi...    75   3e-14
NMB0681 [O] COG0425 Predicted redox protein, regulator of disulf...    75   3e-14

>RSc0810 [O] COG0425 Predicted redox protein, regulator of disulfide bond
          formation Rso Ralstonia solanacearum
          Length = 75

 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 67/75 (89%)

Query: 3  IEFHRELDARGLNCPLPILKTKKALADMSSGQVLRVTATDTGSVRDFQAFAKQTGNDLLS 62
          +EF +E+DARGLNCPLPIL+TKKALADM SG+VL+V ATD G+ RDFQAFAKQTGN+LL+
Sbjct: 1  MEFQKEIDARGLNCPLPILRTKKALADMQSGEVLKVLATDPGATRDFQAFAKQTGNELLA 60

Query: 63 QSQENQEFIFFMKRK 77
           S++++ F F+M+R+
Sbjct: 61 HSEQDKVFTFYMRRR 75


>BS_yrkI [O] COG0425 Predicted redox protein, regulator of disulfide bond
          formation Bsu Bacillus subtilis
          Length = 75

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 49/68 (72%)

Query: 9  LDARGLNCPLPILKTKKALADMSSGQVLRVTATDTGSVRDFQAFAKQTGNDLLSQSQENQ 68
          LDA+GL CP+PI++TKKA+ ++ SGQ+L V ATD G+  D  A++K  G+DLL Q+ E  
Sbjct: 7  LDAKGLACPMPIVRTKKAMNELESGQILEVHATDKGAKNDLTAWSKSGGHDLLEQTDEGD 66

Query: 69 EFIFFMKR 76
             F++++
Sbjct: 67 ILKFWIQK 74


>BS_yrkF_1 [O] COG0425 Predicted redox protein, regulator of disulfide bond
          formation Bsu Bacillus subtilis
          Length = 105

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 47/68 (69%)

Query: 9  LDARGLNCPLPILKTKKALADMSSGQVLRVTATDTGSVRDFQAFAKQTGNDLLSQSQENQ 68
          LDA+GL CP+PI+KTKK + D+ +G+VL + ATD GS  D +A+AK TG++ L    E +
Sbjct: 8  LDAKGLACPMPIVKTKKRMKDLKAGEVLEIHATDKGSTADLEAWAKSTGHEYLGTEAEGE 67

Query: 69 EFIFFMKR 76
              F+++
Sbjct: 68 ILRHFLRK 75


>PA1006 [O] COG0425 Predicted redox protein, regulator of disulfide bond
          formation Pae Pseudomonas aeruginosa
          Length = 83

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 49/70 (70%)

Query: 8  ELDARGLNCPLPILKTKKALADMSSGQVLRVTATDTGSVRDFQAFAKQTGNDLLSQSQEN 67
          ELDA GLNCPLP+LK K  L  + SG VL+V ATD GS RDF+AFA+  G++LL +    
Sbjct: 14 ELDASGLNCPLPLLKAKLELNRLPSGGVLKVIATDAGSQRDFRAFAQLAGHELLREEAAE 73

Query: 68 QEFIFFMKRK 77
            + ++++++
Sbjct: 74 GVYRYWLRKR 83


>NMB0681 [O] COG0425 Predicted redox protein, regulator of disulfide bond
          formation Nme Neisseria meningitidis MC58
          Length = 74

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 46/69 (66%)

Query: 9  LDARGLNCPLPILKTKKALADMSSGQVLRVTATDTGSVRDFQAFAKQTGNDLLSQSQENQ 68
          LD  GL CPLPIL+ KKALA M  G VL V ATD G+  DF+AF +QTG+ LL  S+++ 
Sbjct: 6  LDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPGDFEAFCRQTGHVLLDASEQDG 65

Query: 69 EFIFFMKRK 77
           F   ++ K
Sbjct: 66 VFTLVVQHK 74