BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0052.p         (161 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2520 [P] COG3696 Putative silver efflux pump Pae Pseudomonas a...   208   5e-54
RSp0493 [P] COG3696 Putative silver efflux pump Rso Ralstonia so...   199   3e-51
CC2390 Non COG                                                        184   7e-47
CC2724 Non COG                                                        160   9e-40
RSp1040 [P] COG3696 Putative silver efflux pump Rso Ralstonia so...   133   2e-31

>PA2520 [P] COG3696 Putative silver efflux pump Pae Pseudomonas aeruginosa
          Length = 1051

 Score =  208 bits (529), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 111/130 (85%), Positives = 120/130 (92%), Gaps = 2/130 (1%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            GIP  LTGGVLAL +RGIPLSISAAVGFIALSGVAVLNGLVMI+FIR L +EGRSLD A+
Sbjct: 912  GIPFALTGGVLALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRNLLQEGRSLDQAV 971

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
            +EGA+TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSST+LTLLVLP+
Sbjct: 972  WEGAITRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTMLTLLVLPV 1031

Query: 121  LYRLVHAGDS 130
            LYR  H  D+
Sbjct: 1032 LYRWTHGRDA 1041


>RSp0493 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum
          Length = 1064

 Score =  199 bits (505), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 106/126 (84%), Positives = 119/126 (94%), Gaps = 2/126 (1%)

Query: 3    GIP--LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            GIP  L+GGV+ALA+RGIPLSISAAVGFIALSGVAVLNGLVM++FIR+LRE+G+ +D A+
Sbjct: 912  GIPFALSGGVVALALRGIPLSISAAVGFIALSGVAVLNGLVMLSFIRSLREDGKPVDAAV 971

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
             EGA+TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSST LTLLVLP+
Sbjct: 972  REGALTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTALTLLVLPV 1031

Query: 121  LYRLVH 126
            LYRL +
Sbjct: 1032 LYRLAY 1037


>CC2390 Non COG
          Length = 1057

 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 98/127 (77%), Positives = 111/127 (87%), Gaps = 2/127 (1%)

Query: 3    GIPL--TGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAI 60
            G+PL  TGGV AL +RG+PLSISA VGFIALSGVAVLNG+VM++FIRTLR++G  +D AI
Sbjct: 925  GVPLALTGGVAALLLRGMPLSISAGVGFIALSGVAVLNGVVMVSFIRTLRQQGTDVDHAI 984

Query: 61   FEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPL 120
             EGA+TRLRPVLMTALVASLGFVPMA   G GAEVQRPLATVVIGGI+SSTLLTL VLP 
Sbjct: 985  REGALTRLRPVLMTALVASLGFVPMAFNVGAGAEVQRPLATVVIGGIISSTLLTLQVLPA 1044

Query: 121  LYRLVHA 127
            LYRL ++
Sbjct: 1045 LYRLAYS 1051


>CC2724 Non COG
          Length = 1080

 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 86/120 (71%), Positives = 98/120 (81%)

Query: 6    LTGGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFIRTLREEGRSLDDAIFEGAM 65
            L GGV  LA+RGIP S+SAAVGFIALSGVAVLNGLVM+  IR    +G +L+ AI  GAM
Sbjct: 941  LAGGVFGLALRGIPFSVSAAVGFIALSGVAVLNGLVMMTAIRQRLAQGLALEQAIIAGAM 1000

Query: 66   TRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLVLPLLYRLV 125
             RLRPV+MT LVASLGFVPMALAT TGAEVQRPLATVVIGG++++T LTL VLP + R V
Sbjct: 1001 ERLRPVMMTGLVASLGFVPMALATETGAEVQRPLATVVIGGLITATALTLFVLPAICRFV 1060


>RSp1040 [P] COG3696 Putative silver efflux pump Rso Ralstonia solanacearum
          Length = 1038

 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 101/130 (77%), Gaps = 3/130 (2%)

Query: 1    MRGIPLT--GGVLALAMRGIPLSISAAVGFIALSGVAVLNGLVMIAFI-RTLREEGRSLD 57
            +  +PL   GG++AL +RG+ L++S+AVGFIAL GVAVLN ++M++ + R  +E G SL 
Sbjct: 888  LSAVPLATLGGLIALHLRGMTLNVSSAVGFIALFGVAVLNAIIMVSNLNRWTQEPGISLK 947

Query: 58   DAIFEGAMTRLRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGILSSTLLTLLV 117
            DA+  GA  R+RPVLMTA VA+LG +P ALA G G++VQRPLATVV+GG++++T LTL++
Sbjct: 948  DAVVAGARERMRPVLMTATVAALGLIPAALAHGLGSDVQRPLATVVVGGLVTATALTLVL 1007

Query: 118  LPLLYRLVHA 127
            LP LY L+ A
Sbjct: 1008 LPALYYLIEA 1017