BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0033.p         (70 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMB1950 [J] COG0828 Ribosomal protein S21 Nme Neisseria meningit...   111   5e-25
NMA0502 [J] COG0828 Ribosomal protein S21 NmA Neisseria meningit...   111   5e-25
RSc0008 [J] COG0828 Ribosomal protein S21 Rso Ralstonia solanace...   103   1e-22
rpsU [J] COG0828 Ribosomal protein S21 Eco Escherichia coli K12        84   1e-16
ZrpsU [J] COG0828 Ribosomal protein S21 EcZ Escherichia coli O15...    84   1e-16

>NMB1950 [J] COG0828 Ribosomal protein S21 Nme Neisseria meningitidis MC58
          Length = 70

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 61/70 (87%)

Query: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          M  IR+KENEPFEVAMRRFKR +EKTGLLTELRARE YEKPT ERKRK AAAVKR  KR+
Sbjct: 1  MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAVKRLQKRL 60

Query: 61 RSQQLPKKLY 70
          RSQQLP K+Y
Sbjct: 61 RSQQLPPKMY 70


>NMA0502 [J] COG0828 Ribosomal protein S21 NmA Neisseria meningitidis
          Z2491
          Length = 70

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/70 (81%), Positives = 61/70 (87%)

Query: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          M  IR+KENEPFEVAMRRFKR +EKTGLLTELRARE YEKPT ERKRK AAAVKR  KR+
Sbjct: 1  MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTERKRKKAAAVKRLQKRL 60

Query: 61 RSQQLPKKLY 70
          RSQQLP K+Y
Sbjct: 61 RSQQLPPKMY 70


>RSc0008 [J] COG0828 Ribosomal protein S21 Rso Ralstonia solanacearum
          Length = 70

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/70 (77%), Positives = 59/70 (84%)

Query: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          MTTIRLKENEP EVA+RRF+R IE+TGL+ ELRAR  YEKPT ERKRK AAAV R  KR+
Sbjct: 1  MTTIRLKENEPVEVALRRFRREIERTGLIKELRARTAYEKPTTERKRKKAAAVSRTRKRL 60

Query: 61 RSQQLPKKLY 70
          RSQ LPKKLY
Sbjct: 61 RSQMLPKKLY 70


>rpsU [J] COG0828 Ribosomal protein S21 Eco Escherichia coli K12
          Length = 71

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 50/60 (83%)

Query: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          M  I+++ENEPF+VA+RRFKR+ EK G+L E+R REFYEKPT ERKR  A+AVKRH K++
Sbjct: 1  MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL 60


>ZrpsU [J] COG0828 Ribosomal protein S21 EcZ Escherichia coli O157:H7
          EDL933
          Length = 71

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 50/60 (83%)

Query: 1  MTTIRLKENEPFEVAMRRFKRTIEKTGLLTELRAREFYEKPTAERKRKLAAAVKRHYKRI 60
          M  I+++ENEPF+VA+RRFKR+ EK G+L E+R REFYEKPT ERKR  A+AVKRH K++
Sbjct: 1  MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKL 60