BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0029.p         (111 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1190 [L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta ...    66   2e-11

>RSc1190 [L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit
            (contains helicase and exonuclease domains) Rso Ralstonia
            solanacearum
          Length = 1177

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 18   MLAQPALERFFNPALHRHARDEMEIVTADG-VLRCDRVVVFDDEVWVLDYKRNLLDSERV 76
            MLA  AL   F+PA    A +E+E+ + DG +LR DR++   DEV V+DYK  LL  ER 
Sbjct: 1063 MLAAEALAHVFDPARFDVAHNEVELFSPDGALLRIDRLIERGDEVLVVDYKLRLLPVERA 1122

Query: 77   AYQAQLARYRTALLSVFSDKQIRSALITADG 107
            AY  QL  Y  A+  ++  + +R+ + TA G
Sbjct: 1123 AYADQLRGYAAAVAPIYPGRAVRAGVATAQG 1153