BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0023.p         (76 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport...    73   1e-13

>RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport systems,
           periplasmic component Rso Ralstonia solanacearum
          Length = 402

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/40 (90%), Positives = 38/40 (95%)

Query: 1   MLQAQASKAQILGLANAGGDTINSIKAANEFGINKTMKLA 40
           +LQAQASKAQILGLANAGGDTINSIKAA EFGI KTMK+A
Sbjct: 214 LLQAQASKAQILGLANAGGDTINSIKAAKEFGITKTMKIA 253