BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0021.p (433 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport... 616 e-176 BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transpo... 425 e-118 SMc03121 [E] COG0683 ABC-type branched-chain amino acid transpor... 422 e-118 AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport... 413 e-115 RSp1298 [E] COG0683 ABC-type branched-chain amino acid transport... 153 8e-37 >RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Rso Ralstonia solanacearum Length = 402 Score = 616 bits (1588), Expect = e-176, Method: Compositional matrix adjust. Identities = 296/397 (74%), Positives = 337/397 (84%), Gaps = 1/397 (0%) Query: 37 IAATVVAACAAGFAGPAAAQISGEVVKIGLITDLSGVYIDIDGQGGVEAIKMAIADFGGS 96 +A ++AA A A AQ+SG+ VKIG ITDLSG+Y DIDGQGGVEA+KMAI D GG Sbjct: 6 LAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDEGGK 65 Query: 97 VNGKKIELITADHQNKADIAASKAREWFDQQGVDMLIGGTNSGTSLAMAKVAGEKKKTFI 156 V GK IEL+TADHQNKADIAASKAREW DQQG+DML+GGTNS TSLAM+KVA EKK+ FI Sbjct: 66 VLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKRVFI 125 Query: 157 AVGGATARLTNEECTPYTIHYAYDTVALAKGTGSAIVKNGGKSWYFLTADYAFGASLEKD 216 +G TARLTNEECTPYTIHYAYDTVALAKGTGSA+VK GGKSW+FLTADYAFG SLE D Sbjct: 126 GIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSLEND 185 Query: 217 TSDIVKANGGTVTGAVKHPLGASDFSSFMLQAQASKAQILGLANAGGDTINSIKAANEFG 276 T+ +VKANGGTV G+VKHPL ASDFSS++LQAQASKAQILGLANAGGDTINSIKAA EFG Sbjct: 186 TAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKAAKEFG 245 Query: 277 INKTMKLAGLLMFINDVHALTLQVTQGMYLTDGWYWDMNQETRDWSKRYFAKMKRMPSML 336 I KTMK+AGLLMFINDVH+L LQ +G+ +TD WYWDMN TR ++ RYF+KMK+MPS L Sbjct: 246 ITKTMKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMPSSL 305 Query: 337 QAADYSATTQYLNAVKASGTDDPDKVIAQMHKTKINDFFAKNGYIRPDGRMVHDMYLMEV 396 QAADYSA + Y+ AV A+GTDDPDKVIAQ+ KT++NDFF+K G IR DGR VHDMYLM+V Sbjct: 306 QAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTQLNDFFSK-GTIRADGRYVHDMYLMQV 364 Query: 397 KKPSESKYPWDYYKVVQTIPAEQAWTTKAESKCSLWK 433 K P+ESK PWDY K+V TIP +QA+TT AESKC L K Sbjct: 365 KTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLLK 401 >BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Bme Brucella melitensis Length = 401 Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/382 (53%), Positives = 275/382 (71%), Gaps = 1/382 (0%) Query: 53 AAAQISGEVVKIGLITDLSGVYIDIDGQGGVEAIKMAIADFGGSVNGKKIELITADHQNK 112 +AA+IS VKIG++ D SGVY D G+ EA KMA DFGG+V G IE+ITADHQNK Sbjct: 19 SAAEISDGKVKIGILNDQSGVYADFGGKWSYEAAKMAAEDFGGTVLGAPIEIITADHQNK 78 Query: 113 ADIAASKAREWFDQQGVDMLIGGTNSGTSLAMAKVAGEKKKTFIAVGGATARLTNEECTP 172 D+A++ AR+W+D + VD ++ T S LA+ ++ EKKK I G AT+ LT ++CTP Sbjct: 79 PDVASNIARQWYDTEQVDSIMELTTSSVGLAVQALSKEKKKITINTGAATSELTGKQCTP 138 Query: 173 YTIHYAYDTVALAKGTGSAIVKNGGKSWYFLTADYAFGASLEKDTSDIVKANGGTVTGAV 232 Y H+AYDT ALA GTG ++V+ GG +WYFLTADYAFG SLE+ T+ V++ GG V G+V Sbjct: 139 YGFHWAYDTHALAVGTGGSLVQQGGDTWYFLTADYAFGYSLEEQTTKFVESKGGKVLGSV 198 Query: 233 KHPLGASDFSSFMLQAQASKAQILGLANAGGDTINSIKAANEFGI-NKTMKLAGLLMFIN 291 +HPL +D+SSF+LQAQAS A+++GLANAG DT N+IK A EFGI +LA LL + Sbjct: 199 RHPLSTTDYSSFLLQAQASGAKVVGLANAGLDTSNAIKQAAEFGIVAGGQRLAALLFTLA 258 Query: 292 DVHALTLQVTQGMYLTDGWYWDMNQETRDWSKRYFAKMKRMPSMLQAADYSATTQYLNAV 351 +VH L L+ QG+ LT+G+YWD + E+R + KR+F + RMP+M+QA YSA QYL A+ Sbjct: 259 EVHGLGLEAAQGLTLTEGFYWDRDDESRAFGKRFFDRTGRMPNMIQAGTYSAVLQYLKAI 318 Query: 352 KASGTDDPDKVIAQMHKTKINDFFAKNGYIRPDGRMVHDMYLMEVKKPSESKYPWDYYKV 411 K +GTD+ + V ++H+ + D FA++G + P+GRM++DMYLMEVKKP ESK PWDYYKV Sbjct: 319 KEAGTDETEAVAKKLHEMPVEDVFARHGKVGPNGRMIYDMYLMEVKKPEESKAPWDYYKV 378 Query: 412 VQTIPAEQAWTTKAESKCSLWK 433 + TIP +QA+ ES C L K Sbjct: 379 LATIPGDQAYMKPEESGCPLVK 400 >SMc03121 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Sme Sinorhizobium meliloti Length = 401 Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/405 (51%), Positives = 281/405 (69%), Gaps = 6/405 (1%) Query: 30 MKVKMTAIAATVVAACAAGFAGPAAAQISGEVVKIGLITDLSGVYIDIDGQGGVEAIKMA 89 M K+ A A V+A A A A S VKIG++ D SGVY D G+ EA MA Sbjct: 1 MHKKLIATLAMVLAGSTA-----ALADASDGKVKIGILNDQSGVYADFGGKSSYEAALMA 55 Query: 90 IADFGGSVNGKKIELITADHQNKADIAASKAREWFDQQGVDMLIGGTNSGTSLAMAKVAG 149 + DFGG V G +E++TADHQNK DIA++ AR+W+D + VD ++ T S +LA+ ++ Sbjct: 56 VEDFGGKVLGVPVEVVTADHQNKPDIASNIARQWYDTEQVDSIMELTTSSVALAVQAISK 115 Query: 150 EKKKTFIAVGGATARLTNEECTPYTIHYAYDTVALAKGTGSAIVKNGGKSWYFLTADYAF 209 EKKK I G AT LT ++C+PY H+AYDT +LA GTG A+VK GG SW+FLTADYAF Sbjct: 116 EKKKIDIVTGAATTELTGKQCSPYGFHWAYDTHSLAVGTGGALVKQGGDSWFFLTADYAF 175 Query: 210 GASLEKDTSDIVKANGGTVTGAVKHPLGASDFSSFMLQAQASKAQILGLANAGGDTINSI 269 G SLE++T + VK NGGTV GAV+HPL +DFSSF+LQAQ+S A+++GLANAG DT N+I Sbjct: 176 GYSLEENTGNYVKENGGTVVGAVRHPLATTDFSSFLLQAQSSGAKVIGLANAGLDTSNAI 235 Query: 270 KAANEFGINK-TMKLAGLLMFINDVHALTLQVTQGMYLTDGWYWDMNQETRDWSKRYFAK 328 K A EFGI + +LA LL + +VH L L QG+ LT+G+YW+ ++E+ + KR+ + Sbjct: 236 KQAAEFGIVQGGQRLAALLFTLAEVHGLGLDAAQGLTLTEGFYWNRDEESAKFGKRFMER 295 Query: 329 MKRMPSMLQAADYSATTQYLNAVKASGTDDPDKVIAQMHKTKINDFFAKNGYIRPDGRMV 388 +MP+M+ A YSA QYL A++ +GTD+ + V ++H ++D FAKNG + P+GRM+ Sbjct: 296 TGKMPNMVHAGTYSAVLQYLKAIEKAGTDETEAVAKELHALPVDDVFAKNGTVAPNGRMI 355 Query: 389 HDMYLMEVKKPSESKYPWDYYKVVQTIPAEQAWTTKAESKCSLWK 433 HDMYL+EVKKP ESK PWDY+KV+ TIP ++A+ A+S C L K Sbjct: 356 HDMYLLEVKKPDESKEPWDYFKVLATIPGKEAFIDPAQSGCELVK 400 >AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 402 Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/379 (51%), Positives = 271/379 (71%), Gaps = 1/379 (0%) Query: 56 QISGEVVKIGLITDLSGVYIDIDGQGGVEAIKMAIADFGGSVNGKKIELITADHQNKADI 115 +IS VKIG++ D SGVY + G+ EA KMA+ DFGG V G +E++TADHQNKAD+ Sbjct: 23 EISDGKVKIGILNDQSGVYANFGGKYSYEAAKMAVEDFGGKVLGAPVEVVTADHQNKADV 82 Query: 116 AASKAREWFDQQGVDMLIGGTNSGTSLAMAKVAGEKKKTFIAVGGATARLTNEECTPYTI 175 A++ AR+W+D + VD ++ T+S LA+ ++ +KKK + G AT LT ++C+PY Sbjct: 83 ASNIARQWYDTEQVDSIMELTSSSVGLAVQALSKDKKKITVNTGAATTELTGKQCSPYGF 142 Query: 176 HYAYDTVALAKGTGSAIVKNGGKSWYFLTADYAFGASLEKDTSDIVKANGGTVTGAVKHP 235 H+AYDT +LA GTG A+VK GG SW+FLTADYAFG SLE++TS+ VKANGG V G+V+HP Sbjct: 143 HWAYDTYSLAVGTGGALVKQGGDSWFFLTADYAFGYSLEENTSNFVKANGGKVLGSVRHP 202 Query: 236 LGASDFSSFMLQAQASKAQILGLANAGGDTINSIKAANEFGI-NKTMKLAGLLMFINDVH 294 L +D+SSF+LQAQ+S A+++GLANAG DT N+IK A+EFGI +LA LL + +VH Sbjct: 203 LATTDYSSFLLQAQSSGAKVIGLANAGLDTSNAIKQASEFGIVAGGQRLAALLFTLAEVH 262 Query: 295 ALTLQVTQGMYLTDGWYWDMNQETRDWSKRYFAKMKRMPSMLQAADYSATTQYLNAVKAS 354 L L+ QG+ LT+G+YWD + E+R + +R+ + MP+M+ YSA YL A++ + Sbjct: 263 GLGLEAAQGLTLTEGFYWDRDDESRKFGERFKERTGAMPNMIHTGTYSAVLHYLKAIEKA 322 Query: 355 GTDDPDKVIAQMHKTKINDFFAKNGYIRPDGRMVHDMYLMEVKKPSESKYPWDYYKVVQT 414 GTDD D V M + +ND FAK+G++ +GRM+HDMYLMEVKKP ESK PWDYYKV+ T Sbjct: 323 GTDDADAVAKAMKEMPVNDVFAKDGHVAANGRMIHDMYLMEVKKPDESKQPWDYYKVLAT 382 Query: 415 IPAEQAWTTKAESKCSLWK 433 IP ++A+ +S C L K Sbjct: 383 IPGKEAFMDPTKSGCPLVK 401 >RSp1298 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Rso Ralstonia solanacearum Length = 391 Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 86/261 (32%), Positives = 146/261 (55%), Gaps = 7/261 (2%) Query: 56 QISGEV-VKIGLITDLSGVYIDIDGQGGVEAIKMAIADFG--GSVNGKKIELITADHQNK 112 Q GE ++IG++ ++GVY + Q V ++A+A G + G+ IEL+ D N Sbjct: 33 QARGEAPLRIGMVDPMTGVYAAV-AQNEVTGARLAVAQINARGGILGRPIELLVEDSAND 91 Query: 113 ADIAASKAREWFDQQGVDMLIGGTNSGTSLAMAKVAGEKKKTFIAVGGATARLTNEECTP 172 KAR+ ++ V LIG NSG + A+A+V+ EKK I GG T +T +C Sbjct: 92 VGTGVQKARKLIERDQVSFLIGDVNSGIAQAIAQVSNEKKVLHIVSGGHTDTITGSDCK- 150 Query: 173 YTIHYAYDTVAL-AKGTGSAIVKNGGKSWYFLTADYAFGASLEKDTSDIVKANGGTVTGA 231 + ++ +T ++ A + + GK W+F+T DYAFG +L+K + ++ GGT+TG Sbjct: 151 WNVYRVCNTTSMEANAVANLLFSKYGKKWHFITPDYAFGHTLQKAAAADLQKLGGTITGN 210 Query: 232 VKHPLGASDFSSFMLQAQASKAQILGLANAGGDTINSIKAANEFGINKTMKLAGLLMFIN 291 PLG +DFS+++++A+A+ +L + G D +N +K +FGI K M +AGL + Sbjct: 211 ELTPLGTTDFSAYLIKARAANPDVLLVLPQGSDMVNCLKQIAQFGIGKQMHIAGLQQELE 270 Query: 292 DVHALTLQVTQGMYLTDGWYW 312 + A+ + G+++ + WYW Sbjct: 271 SLEAMPPEARVGIWMFE-WYW 290