BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0098.p (216 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl980GM [E] COG0765 ABC-type amino acid transport system, perme... 262 4e-70 AGc2581 [E] COG0765 ABC-type amino acid transport system, permea... 246 4e-65 AGc2569 [E] COG0765 ABC-type amino acid transport system, permea... 228 8e-60 SMa0081 [E] COG0765 ABC-type amino acid transport system, permea... 227 2e-59 AGpA330 [E] COG0765 ABC-type amino acid transport system, permea... 207 2e-53 >AGl980GM [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 126/215 (58%), Positives = 166/215 (77%), Gaps = 1/215 (0%) Query: 3 SFTFLHVEYLLQAAVWTIVLSLVAFAFGGAAGFVIALWRVSPNKTLRAIASWYIQIVQGI 62 +F + +LL A WT++L+++A GG GF IAL R S NK LR A YIQ++QGI Sbjct: 5 TFGWNEFGFLLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQGI 64 Query: 63 PLLVILFVAYFGLAIAGFKLSPLVAAGISFAVYCAAFLGEIWRGCIQAVPKTQWEASECL 122 P+L+ILF++Y+GL++AG +L PL+AAG S +Y + +L EIWRGCIQAVPK QWEASE L Sbjct: 65 PVLMILFLSYYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESL 124 Query: 123 GFNRFEQLQKVILPQAFKIAIPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQP 182 R +Q + VILPQA +I++PPTVGF VQ+VKNTS+AS+IGFV+L+RAGQ+INN+TFQP Sbjct: 125 ALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQP 184 Query: 183 FTVFGCVALIYFCLCYPLSALSKHFERKLNV-SNR 216 F VF VA++YF +CYPLS LS+ ER+L+ SNR Sbjct: 185 FRVFVAVAVLYFIVCYPLSQLSRWLERRLHAGSNR 219 >AGc2581 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 114/215 (53%), Positives = 165/215 (76%) Query: 1 VTSFTFLHVEYLLQAAVWTIVLSLVAFAFGGAAGFVIALWRVSPNKTLRAIASWYIQIVQ 60 +++F + +LL+ A W+IVL+ +AF+ G G A+ R+S ++R +A+ YI ++Q Sbjct: 1 MSTFGWPEFLFLLRGAGWSIVLTAIAFSIGSLTGGFFAIMRLSQYGSVRNVAAGYITVIQ 60 Query: 61 GIPLLVILFVAYFGLAIAGFKLSPLVAAGISFAVYCAAFLGEIWRGCIQAVPKTQWEASE 120 IP+L+ILF++Y+GL + GF++ PL+AA +S +VY +A+L EIWRG IQAVPK QWEAS Sbjct: 61 SIPVLMILFMSYYGLTLFGFEIPPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASA 120 Query: 121 CLGFNRFEQLQKVILPQAFKIAIPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTF 180 L RF+Q + VILPQA ++++PPTVGF+VQ+VKNTS+ SV+GFV+LSRAGQ++NN+TF Sbjct: 121 SLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATF 180 Query: 181 QPFTVFGCVALIYFCLCYPLSALSKHFERKLNVSN 215 +PF VF VAL+YF +C+PLS LS+H ER L+V Sbjct: 181 RPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGR 215 >AGc2569 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 219 Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 109/205 (53%), Positives = 154/205 (75%) Query: 12 LLQAAVWTIVLSLVAFAFGGAAGFVIALWRVSPNKTLRAIASWYIQIVQGIPLLVILFVA 71 LL A WT++LSLV+FA GG ++ R+S K++R A +Y+++ QG PLL+ LF+A Sbjct: 13 LLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIA 72 Query: 72 YFGLAIAGFKLSPLVAAGISFAVYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFEQLQ 131 +FGL + G + +AAG++ ++ AAFL EIWRGC+++V K QWEAS L R +Q++ Sbjct: 73 FFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMR 132 Query: 132 KVILPQAFKIAIPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGCVAL 191 VILPQA ++AIPPTVGF VQ++K T++ S+IGFV+LS+AG ++ N+TFQPFTV+G VAL Sbjct: 133 YVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFTVYGLVAL 192 Query: 192 IYFCLCYPLSALSKHFERKLNVSNR 216 IYF LC+PLS S+ ERKLNV++R Sbjct: 193 IYFALCWPLSKSSQILERKLNVAHR 217 >SMa0081 [E] COG0765 ABC-type amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 218 Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 108/201 (53%), Positives = 149/201 (74%) Query: 12 LLQAAVWTIVLSLVAFAFGGAAGFVIALWRVSPNKTLRAIASWYIQIVQGIPLLVILFVA 71 ++ AA WTI LS +AFA G G ++AL RVS + LR A+ +I++ QG PLL+ LF+ Sbjct: 13 IVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVFQGTPLLMQLFLV 72 Query: 72 YFGLAIAGFKLSPLVAAGISFAVYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRFEQLQ 131 +FG+ I GF ++P +AA I+ A++ +AFLGEIWRGCI+AVPK Q EA+ LG F ++ Sbjct: 73 FFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMR 132 Query: 132 KVILPQAFKIAIPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFGCVAL 191 VILPQA +IA+ PTVGF+VQ++K TSLAS+IGF +L+R GQIINN+TF PF VFG VA Sbjct: 133 HVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNATFSPFLVFGTVAA 192 Query: 192 IYFCLCYPLSALSKHFERKLN 212 +YF LC+PLS +++ E + + Sbjct: 193 VYFLLCWPLSLIARRMETRFS 213 >AGpA330 [E] COG0765 ABC-type amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 146/210 (69%), Gaps = 1/210 (0%) Query: 4 FTFLHVEYLLQAAVWTIVLSLVAFAFGGAAGFVIALWRVSPNKTLRAIASWYIQIVQGIP 63 F+F + +L A WT +++ +A AFG G +A+ R S + LR IAS +++++QGIP Sbjct: 4 FSFSDLLFLATALEWTFLMAAIALAFGVPLGLALAIARTSGSTVLRVIASAFVELIQGIP 63 Query: 64 LLVILFVAYFGLAI-AGFKLSPLVAAGISFAVYCAAFLGEIWRGCIQAVPKTQWEASECL 122 LL +L YFG+ + AG + +VA G ++ +Y A FLG+IWRG IQAV + QWEA CL Sbjct: 64 LLGLLMFFYFGIPVLAGKDVPTVVAVGAAYTIYTAVFLGDIWRGGIQAVRQAQWEAGACL 123 Query: 123 GFNRFEQLQKVILPQAFKIAIPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQP 182 G + +Q +I PQAF+IA+P TVGF+VQ++KNTSLASV+G V+L+RAGQ+I+ TFQP Sbjct: 124 GLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLVELARAGQMISAGTFQP 183 Query: 183 FTVFGCVALIYFCLCYPLSALSKHFERKLN 212 V+ VA IYF +C+PL+ S+ E +LN Sbjct: 184 LLVYTLVAAIYFTICFPLTTWSRTLEARLN 213