BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0090.p         (218 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2872 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso ...   159   4e-39
BMEI1945 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bme...   152   6e-37
Rv1070c [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mtu ...   148   8e-36
MT1100 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase MtC M...   148   8e-36
mll5584 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo ...   147   2e-35

>RSc2872 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Rso Ralstonia
           solanacearum
          Length = 258

 Score =  159 bits (403), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 90/110 (81%)

Query: 109 RAVSKAKAMDLCLTGRMMDAQEAERAGLVSRVVAADKLMDEALAAAIVITEMSQPVAAMV 168
           RAVSKAKAMDLCLT RMM A EAERAGLVSRV+ ADKL+DEALAAA  I   S P A M+
Sbjct: 149 RAVSKAKAMDLCLTARMMGADEAERAGLVSRVIPADKLLDEALAAAETIAGFSLPTAMMI 208

Query: 169 KDSVNRAYETTLAEGIKYERALFYSCFATEDQTEGMAAFLEKRTPSFKNQ 218
           K+S+N AYETTL+EG++ ER LF++ FATEDQ EGM AFL KR P+FK++
Sbjct: 209 KESINAAYETTLSEGVRLERRLFHATFATEDQKEGMHAFLGKRQPAFKHR 258


>BMEI1945 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Bme Brucella
           melitensis
          Length = 293

 Score =  152 bits (383), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 89/110 (80%)

Query: 109 RAVSKAKAMDLCLTGRMMDAQEAERAGLVSRVVAADKLMDEALAAAIVITEMSQPVAAMV 168
           R V K+KAMD+CLTGRMMDA EAER GLVSRVVA + L++EAL AA  I   S+    M 
Sbjct: 184 RYVGKSKAMDMCLTGRMMDAAEAERCGLVSRVVAPEALLEEALKAAERIASFSRVSVYMA 243

Query: 169 KDSVNRAYETTLAEGIKYERALFYSCFATEDQTEGMAAFLEKRTPSFKNQ 218
           K++VNRAYETTL EG+++ER LF+S FATEDQ EGM+AF++KRTPSFKN+
Sbjct: 244 KEAVNRAYETTLDEGLRFERRLFHSLFATEDQKEGMSAFVDKRTPSFKNR 293


>Rv1070c [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mtu
           Mycobacterium tuberculosis H37Rv
          Length = 257

 Score =  148 bits (374), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 88/110 (80%)

Query: 109 RAVSKAKAMDLCLTGRMMDAQEAERAGLVSRVVAADKLMDEALAAAIVITEMSQPVAAMV 168
           RA+ KAKAMDL LTGR MDA EAER+GLVSRVV AD L+ EA A A  I++MS   A M 
Sbjct: 148 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMA 207

Query: 169 KDSVNRAYETTLAEGIKYERALFYSCFATEDQTEGMAAFLEKRTPSFKNQ 218
           K++VNRA+E++L+EG+ YER LF+S FATEDQ+EGMAAF+EKR P F ++
Sbjct: 208 KEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR 257


>MT1100 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase MtC
           Mycobacterium tuberculosis CDC1551
          Length = 257

 Score =  148 bits (374), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 71/110 (64%), Positives = 88/110 (80%)

Query: 109 RAVSKAKAMDLCLTGRMMDAQEAERAGLVSRVVAADKLMDEALAAAIVITEMSQPVAAMV 168
           RA+ KAKAMDL LTGR MDA EAER+GLVSRVV AD L+ EA A A  I++MS   A M 
Sbjct: 148 RAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMA 207

Query: 169 KDSVNRAYETTLAEGIKYERALFYSCFATEDQTEGMAAFLEKRTPSFKNQ 218
           K++VNRA+E++L+EG+ YER LF+S FATEDQ+EGMAAF+EKR P F ++
Sbjct: 208 KEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR 257


>mll5584 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo
           Mesorhizobium loti
          Length = 257

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 87/110 (79%)

Query: 109 RAVSKAKAMDLCLTGRMMDAQEAERAGLVSRVVAADKLMDEALAAAIVITEMSQPVAAMV 168
           R V K+KAMD+CLTGRMMDA EAER+GLVSRVV A +L++EA+ AA  I + S P   M 
Sbjct: 148 RFVGKSKAMDMCLTGRMMDAAEAERSGLVSRVVPAAELVEEAVKAAAKIADFSLPSVMMA 207

Query: 169 KDSVNRAYETTLAEGIKYERALFYSCFATEDQTEGMAAFLEKRTPSFKNQ 218
           K++VNR+YETTL EG+++ER LF+S FA EDQ EGMAAF EKR P+F N+
Sbjct: 208 KEAVNRSYETTLTEGLRFERRLFHSLFALEDQKEGMAAFAEKRKPNFANR 257