BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0089.p (270 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value STM2562 [T] COG2204 Response regulator containing CheY-like rece... 317 3e-86 yfhA [T] COG2204 Response regulator containing CheY-like receive... 314 1e-85 ZyfhA [T] COG2204 Response regulator containing CheY-like receiv... 314 1e-85 ECs3420 [T] COG2204 Response regulator containing CheY-like rece... 314 1e-85 YPO2914 [T] COG2204 Response regulator containing CheY-like rece... 306 2e-83 >STM2562 [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Sty Salmonella typhimurium LT2 Length = 445 Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 155/247 (62%), Positives = 195/247 (78%) Query: 12 PEQLLESELFGHVKGAFTGAVEHRKGLFQAADGGTLFLDEIGDMPLPLQVKLLRVLQERT 71 PEQLLESELFGH +GAFTGAV +R+GLFQAA+GGTLFLDEIGDMP PLQVKLLRVLQER Sbjct: 198 PEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERK 257 Query: 72 VRPVGANDSTPVDVRILSATHRNLDAAMADGSFREDLYYRLNVVTLSLPLLVERREDIAL 131 VRP+G+N +DVRI+SATHR+L AMA G FREDLYYRLNVV+L +P L ER EDI L Sbjct: 258 VRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPL 317 Query: 132 LANHFLQAIAERYQKKLNGFAPDALEILMMASWPGNVRQLYNVVEQVCALSTAPLIPAAL 191 LANH L+ A+R++ + F+ DA++ LM ASWPGNVRQL NV+EQ AL+++P+I AL Sbjct: 318 LANHLLRQSAQRHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDAL 377 Query: 192 VQRALRVPALEVLRYADAKQRFERDYLIQLLKLTDGNVADAARLADRNRTEFYRLLQKNG 251 V++AL + +A+A+ +FE +YL +LL++T GNV AAR+A RNRTEFY+LL ++ Sbjct: 378 VEQALEGENTALPTFAEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHE 437 Query: 252 LDPRLFR 258 LD F+ Sbjct: 438 LDANDFK 444 >yfhA [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Eco Escherichia coli K12 Length = 444 Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 154/247 (62%), Positives = 194/247 (78%) Query: 12 PEQLLESELFGHVKGAFTGAVEHRKGLFQAADGGTLFLDEIGDMPLPLQVKLLRVLQERT 71 PEQLLESELFGH +GAFTGAV +R+GLFQAA+GGTLFLDEIGDMP PLQVKLLRVLQER Sbjct: 197 PEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERK 256 Query: 72 VRPVGANDSTPVDVRILSATHRNLDAAMADGSFREDLYYRLNVVTLSLPLLVERREDIAL 131 VRP+G+N ++VRI+SATHR+L AMA G FREDLYYRLNVV+L +P L ER EDI L Sbjct: 257 VRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPL 316 Query: 132 LANHFLQAIAERYQKKLNGFAPDALEILMMASWPGNVRQLYNVVEQVCALSTAPLIPAAL 191 LANH L+ AER++ + F+ DA++ LM ASWPGNVRQL NV+EQ AL+++P+I AL Sbjct: 317 LANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDAL 376 Query: 192 VQRALRVPALEVLRYADAKQRFERDYLIQLLKLTDGNVADAARLADRNRTEFYRLLQKNG 251 V++AL + + +A+ +FE +YL +LL++T GNV AAR+A RNRTEFY+LL ++ Sbjct: 377 VEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHE 436 Query: 252 LDPRLFR 258 LD F+ Sbjct: 437 LDANDFK 443 >ZyfhA [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains EcZ Escherichia coli O157:H7 EDL933 Length = 444 Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 154/247 (62%), Positives = 194/247 (78%) Query: 12 PEQLLESELFGHVKGAFTGAVEHRKGLFQAADGGTLFLDEIGDMPLPLQVKLLRVLQERT 71 PEQLLESELFGH +GAFTGAV +R+GLFQAA+GGTLFLDEIGDMP PLQVKLLRVLQER Sbjct: 197 PEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERK 256 Query: 72 VRPVGANDSTPVDVRILSATHRNLDAAMADGSFREDLYYRLNVVTLSLPLLVERREDIAL 131 VRP+G+N ++VRI+SATHR+L AMA G FREDLYYRLNVV+L +P L ER EDI L Sbjct: 257 VRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPL 316 Query: 132 LANHFLQAIAERYQKKLNGFAPDALEILMMASWPGNVRQLYNVVEQVCALSTAPLIPAAL 191 LANH L+ AER++ + F+ DA++ LM ASWPGNVRQL NV+EQ AL+++P+I AL Sbjct: 317 LANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDAL 376 Query: 192 VQRALRVPALEVLRYADAKQRFERDYLIQLLKLTDGNVADAARLADRNRTEFYRLLQKNG 251 V++AL + + +A+ +FE +YL +LL++T GNV AAR+A RNRTEFY+LL ++ Sbjct: 377 VEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHE 436 Query: 252 LDPRLFR 258 LD F+ Sbjct: 437 LDANDFK 443 >ECs3420 [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Ecs Escherichia coli O157:H7 Length = 444 Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 154/247 (62%), Positives = 194/247 (78%) Query: 12 PEQLLESELFGHVKGAFTGAVEHRKGLFQAADGGTLFLDEIGDMPLPLQVKLLRVLQERT 71 PEQLLESELFGH +GAFTGAV +R+GLFQAA+GGTLFLDEIGDMP PLQVKLLRVLQER Sbjct: 197 PEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERK 256 Query: 72 VRPVGANDSTPVDVRILSATHRNLDAAMADGSFREDLYYRLNVVTLSLPLLVERREDIAL 131 VRP+G+N ++VRI+SATHR+L AMA G FREDLYYRLNVV+L +P L ER EDI L Sbjct: 257 VRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPL 316 Query: 132 LANHFLQAIAERYQKKLNGFAPDALEILMMASWPGNVRQLYNVVEQVCALSTAPLIPAAL 191 LANH L+ AER++ + F+ DA++ LM ASWPGNVRQL NV+EQ AL+++P+I AL Sbjct: 317 LANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDAL 376 Query: 192 VQRALRVPALEVLRYADAKQRFERDYLIQLLKLTDGNVADAARLADRNRTEFYRLLQKNG 251 V++AL + + +A+ +FE +YL +LL++T GNV AAR+A RNRTEFY+LL ++ Sbjct: 377 VEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHE 436 Query: 252 LDPRLFR 258 LD F+ Sbjct: 437 LDANDFK 443 >YPO2914 [T] COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Ype Yersinia pestis Length = 445 Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 152/247 (61%), Positives = 190/247 (76%) Query: 12 PEQLLESELFGHVKGAFTGAVEHRKGLFQAADGGTLFLDEIGDMPLPLQVKLLRVLQERT 71 PEQLLESELFGH KGAFTGAV R+GLFQAA+GGTLFLDEIGDMPL LQVKLLRVLQER Sbjct: 198 PEQLLESELFGHAKGAFTGAVSSREGLFQAAEGGTLFLDEIGDMPLSLQVKLLRVLQERK 257 Query: 72 VRPVGANDSTPVDVRILSATHRNLDAAMADGSFREDLYYRLNVVTLSLPLLVERREDIAL 131 VRP+G+N ++VR++SATHR+L AMA FREDLYYRLNVV L +P L ER EDI L Sbjct: 258 VRPLGSNRDLSINVRVISATHRDLPKAMAKNEFREDLYYRLNVVNLKIPALHERAEDIPL 317 Query: 132 LANHFLQAIAERYQKKLNGFAPDALEILMMASWPGNVRQLYNVVEQVCALSTAPLIPAAL 191 LANH L+ A+R++ + F+ DA++ LM ASWPGNVRQL NV+EQ AL++AP+I AL Sbjct: 318 LANHLLRESAKRHKPFVRSFSNDAMKRLMTASWPGNVRQLVNVIEQCVALTSAPVISEAL 377 Query: 192 VQRALRVPALEVLRYADAKQRFERDYLIQLLKLTDGNVADAARLADRNRTEFYRLLQKNG 251 V++AL + + +A+ +FE +YL +LL++ GNV AAR+A RNRTEFY+LL ++ Sbjct: 378 VEQALEGENTVLPTFVEARNQFELNYLRKLLQIAKGNVTQAARMAGRNRTEFYKLLSRHE 437 Query: 252 LDPRLFR 258 LD F+ Sbjct: 438 LDANDFK 444