BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0075.p         (332 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

alr3904 [R] COG0491 Zn-dependent hydrolases, including glyoxylas...   222   1e-57
slr1259 [R] COG0491 Zn-dependent hydrolases, including glyoxylas...   215   1e-55
RSc1654 [V] COG0841 Cation/multidrug efflux pump Rso Ralstonia s...   124   2e-28
PA3676 [V] COG0841 Cation/multidrug efflux pump Pae Pseudomonas ...   121   2e-27
mlr7298 [V] COG0841 Cation/multidrug efflux pump Mlo Mesorhizobi...   119   9e-27

>alr3904 [R] COG0491 Zn-dependent hydrolases, including glyoxylases Nos
           Nostoc sp. PCC 7120
          Length = 233

 Score =  222 bits (565), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 113/229 (49%), Positives = 153/229 (66%), Gaps = 4/229 (1%)

Query: 1   MIFRQLFDPASCTYTYLLGDRDE--ALLIDPVFEQAPRDLALLDELGLKLLATLDTHVHA 58
           M+FRQLFDP + TYTYL+ D +   A L+DPV EQ  RD  LL EL L L   L+TH+HA
Sbjct: 1   MLFRQLFDPETSTYTYLIADLETKTAALVDPVLEQVERDQKLLTELDLTLGYCLETHIHA 60

Query: 59  DHVTGAWWLHERCGSRIALASVAGAMFSDLPLGHGDRIRFGRRYLEVRATPGHTNGCLTY 118
           DH+TGA  L E+ G    +   A A  ++  +  GD ++FG   +E  ATPGHT+  L Y
Sbjct: 61  DHITGAGKLREKIGCENIVPFGANAACANKKMQPGDVLQFGSVVIEAIATPGHTDSHLAY 120

Query: 119 VLDGQHMAFTGDSLLIRGCGRTDFQQGSPLQLFRSVHEQILTLPDECLLYPAHDYRGITV 178
           +++  H+  TGDSLLIRGCGRTDFQ GS   L+ S+ + + TLP+  L+YP HDY G TV
Sbjct: 121 LVNKTHL-LTGDSLLIRGCGRTDFQSGSAAVLYDSITKNLWTLPETTLVYPGHDYHGQTV 179

Query: 179 TSVGEERRFNPRLGGEADAHDFVGYMDNLNLPHPKLMAQAVPANLRSGK 227
           +++GEE++FN RL G + + +F+  M NLNLP+P+ + +AVPAN R G 
Sbjct: 180 STIGEEKKFNLRLVGRSRS-EFIELMGNLNLPNPQKIMEAVPANQRCGN 227


>slr1259 [R] COG0491 Zn-dependent hydrolases, including glyoxylases Syn
           Synechocystis
          Length = 232

 Score =  215 bits (548), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 111/229 (48%), Positives = 152/229 (66%), Gaps = 4/229 (1%)

Query: 1   MIFRQLFDPASCTYTYLLGDRD--EALLIDPVFEQAPRDLALLDELGLKLLATLDTHVHA 58
           M+FRQLFDP + TYTY++ D     A L+D V EQ  RDL LL EL LKL   L+THVHA
Sbjct: 1   MLFRQLFDPETSTYTYVIADPKGRSAALVDSVLEQVDRDLNLLKELDLKLTFCLETHVHA 60

Query: 59  DHVTGAWWLHERCGSRIALASVAGAMFSDLPLGHGDRIRFGRRYLEVRATPGHTNGCLTY 118
           DH+TGA  L +  G +  +   A    +D  L  G+ +  G   ++  ATPGHT+  L +
Sbjct: 61  DHITGAGKLRQLTGCQNLVPQYAEVDCADRHLQDGEIVHVGSIPIQAIATPGHTDSHLAF 120

Query: 119 VLDGQHMAFTGDSLLIRGCGRTDFQQGSPLQLFRSVHEQILTLPDECLLYPAHDYRGITV 178
           +++  H+  TGD+LLIRGCGRTDFQ G    L+ ++H ++ TLP++  +YP HDYRG TV
Sbjct: 121 LVNQTHV-LTGDALLIRGCGRTDFQSGDAGTLYDAIHGKLFTLPEDVFVYPGHDYRGHTV 179

Query: 179 TSVGEERRFNPRLGGEADAHDFVGYMDNLNLPHPKLMAQAVPANLRSGK 227
           +++GEE+RFNPRL G  D  +F+ +MD+LNLP PK + +AVPAN   G+
Sbjct: 180 STIGEEKRFNPRLLGR-DRQNFIEFMDSLNLPDPKKIMEAVPANQLCGQ 227


>RSc1654 [V] COG0841 Cation/multidrug efflux pump Rso Ralstonia solanacearum
          Length = 1039

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 81/101 (80%)

Query: 231 ARLPAGYAIELAGAAADSSKAQDSIAANVPLVIFIIFTLLMLQLHSFSRAMLVFLTGPLG 290
           A LP  Y I++AGA  +S+ A  SI A +PL IFIIFTLLMLQLHSFSR+++VFLTGPLG
Sbjct: 850 ADLPPDYQIKIAGAEEESANAGASIVAQMPLCIFIIFTLLMLQLHSFSRSVMVFLTGPLG 909

Query: 291 VAGAAVALLVLHRPFGFVAQLGVIALFGMIIRNSVILIDQI 331
           + GAA  LL+L  P GFVAQLG+ AL GMIIRNSVIL+DQI
Sbjct: 910 LIGAAATLLLLRAPMGFVAQLGITALIGMIIRNSVILVDQI 950


>PA3676 [V] COG0841 Cation/multidrug efflux pump Pae Pseudomonas aeruginosa
          Length = 1025

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 119/228 (52%), Gaps = 36/228 (15%)

Query: 116 LTYVLDGQHMAF-TGDSLLIRGCGRTDFQQGSPLQLFRSVHEQILTLPDECLLYPAHDYR 174
           L   L G H++F   D+ LI    R   Q+   L L  S            L  P  + R
Sbjct: 738 LQSALTGSHVSFFREDNELIEILLRGTEQERRDLSLLPS------------LAVPTENGR 785

Query: 175 GITVTSVG------EE-----RRFNPRLGGEADAHDFVGYMDNLNLPHPKLMAQAVPANL 223
            + ++ +       EE     R   P +   AD +D     D+L      L+AQ  P   
Sbjct: 786 SVALSQIATLEYGFEEGIIWHRNRLPTVTVRADIYD-----DSLP---ATLVAQIAP--- 834

Query: 224 RSGKPEDARLPAGYAIELAGAAADSSKAQDSIAANVPLVIFIIFTLLMLQLHSFSRAMLV 283
            + +P  A LP GY +E+ G   D++K Q S+ A VPL I ++ +LLM+QL SFSR  +V
Sbjct: 835 -TLEPIRAELPDGYLLEVGGTVEDAAKGQSSVNAGVPLFIVVVLSLLMVQLRSFSRMAMV 893

Query: 284 FLTGPLGVAGAAVALLVLHRPFGFVAQLGVIALFGMIIRNSVILIDQI 331
           FLT PLG+ G  + LL+  +PFGFVA LG IAL GMI+RNSVIL+DQI
Sbjct: 894 FLTAPLGLIGVTLFLLLFRQPFGFVAMLGTIALAGMIMRNSVILVDQI 941


>mlr7298 [V] COG0841 Cation/multidrug efflux pump Mlo Mesorhizobium loti
          Length = 1046

 Score =  119 bits (298), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 76/99 (76%)

Query: 233 LPAGYAIELAGAAADSSKAQDSIAANVPLVIFIIFTLLMLQLHSFSRAMLVFLTGPLGVA 292
           L  GY IE+ G A DS+++Q SIAA  P+++ II  LLM+QL +F +AMLV  TGPLG+ 
Sbjct: 843 LAPGYKIEIQGGAEDSAESQASIAAKAPIMLAIIVVLLMIQLQNFGKAMLVLATGPLGII 902

Query: 293 GAAVALLVLHRPFGFVAQLGVIALFGMIIRNSVILIDQI 331
           GAA ALL+   PFGFVA LGVIAL G+I+RNS+IL+DQI
Sbjct: 903 GAAAALLISGAPFGFVAILGVIALLGIIMRNSIILVDQI 941