BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0069.p (283 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0589 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 330 3e-90 BMEI1360 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A ... 223 4e-58 AGl3143 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 206 6e-53 mll3370 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 182 8e-46 SMc03245 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A ... 175 8e-44 >RSc0589 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Rso Ralstonia solanacearum Length = 448 Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 179/260 (68%), Positives = 198/260 (76%), Gaps = 6/260 (2%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV G+VTAAGS+ALA AA +DA AV RLR AGAVLLGRTNMSEFAFSGLGL Sbjct: 78 VSIKDLFDVAGQVTAAGSRALAHQSAATSDATAVARLRAAGAVLLGRTNMSEFAFSGLGL 137 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYGTPR P DGTR GGSTSGGAV+VAG MAV ALGTDTGGSIRIP+AFC LTGFKPT Sbjct: 138 NPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCALTGFKPT 197 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDAVPLAGLRFGVTEDFV 180 ARRV + G VPLST+LDS GPLA SVDCCAI DA+LSG+ L TDAVPLAGLR G+T D+V Sbjct: 198 ARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGLRLGLTRDYV 257 Query: 181 NDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKELPSINAGGVSSRLRGASAWTGRCR 240 +DD V AF A+A+L++AGA I RF FPEL +LP IN GG L A AW Sbjct: 258 AADLDDTVATAFARAVAQLERAGAHIVRFEFPELLQLPEINGGG---GLPAAEAWAWH-- 312 Query: 241 CRPHWIRPGRWRAASIAARL 260 RPH R +AAR+ Sbjct: 313 -RPHLARAEAQYDRRVAARI 331 >BMEI1360 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Bme Brucella melitensis Length = 471 Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 123/241 (51%), Positives = 167/241 (69%), Gaps = 6/241 (2%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV GE T AGS DAP A DAL V RLR+AGAV++G+T+M+EFAF+ +GL Sbjct: 84 VSIKDLFDVAGEPTLAGSVVRHDAPPAGCDALIVQRLRNAGAVIIGKTHMTEFAFTPVGL 143 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYG P N +D R+ GGS+SG AVSVA + +A+G+DTGGS+RIP+A GL GFKPT Sbjct: 144 NPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPT 203 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGET-LATDAVPLAGLRFGVTEDF 179 ARR+ L+GA PL+ +LDS GPL R+V +ADA+++GE + + +P+ GLR + +D+ Sbjct: 204 ARRIPLEGAFPLAPSLDSVGPLTRTVADAILADAVMAGEKPILPEVLPVNGLRIALPKDY 263 Query: 180 VNDGMDDAVRAAFDAALARLQKAGALIQRFSFPE----LKELPSINA-GGVSSRLRGASA 234 + M+ V A F+A+LA L+KAGA+I + + LKE I + G+ + AS Sbjct: 264 LLADMEPDVAAHFEASLAALEKAGAIIADLAVDDLIGRLKEATRIGSIAGIEASHIHAST 323 Query: 235 W 235 W Sbjct: 324 W 324 >AGl3143 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 403 Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 115/220 (52%), Positives = 149/220 (67%), Gaps = 3/220 (1%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 V+ KDLFD++G T AGSK L+D A DA V L+ AG V +GRTNMSEFAFSGLG+ Sbjct: 25 VAWKDLFDLEGMPTTAGSKVLSDDAPASRDADVVAALKQAGMVSIGRTNMSEFAFSGLGI 84 Query: 61 NPHYGTPRNPL--DGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFK 118 NPHYGTPRNP+ DG R+ GGS+SG V VA + +A+GTDTGGS+RIP+AF G+ G+K Sbjct: 85 NPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRIPAAFNGVVGYK 144 Query: 119 PTARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDA-VPLAGLRFGVTE 177 + R S+ G PL+ +LDS GPL R+V DA + G T A A +PL+G+ V E Sbjct: 145 ASRGRYSMHGVYPLAKSLDSLGPLTRTVQDAVWVDAAMRGRTAADLARMPLSGVSLVVPE 204 Query: 178 DFVNDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKEL 217 V DG++ V AAF+ A+ RL +AGA ++R +FP EL Sbjct: 205 TVVFDGIEPGVAAAFEQAVERLVRAGASVRRQAFPVFSEL 244 >mll3370 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mlo Mesorhizobium loti Length = 431 Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 111/205 (54%), Positives = 142/205 (69%), Gaps = 1/205 (0%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV EVT AGS A A DA V+RLR AGAV++G+TNM+EFAF+ +G Sbjct: 58 VSIKDLFDVASEVTTAGSLMRKTAAPAMRDAAIVSRLRQAGAVIIGKTNMTEFAFTAIGD 117 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 N HYGTP N +D +R+ GGS+SG VSV + +++G+DTGGSIRIP++ + GFKPT Sbjct: 118 NMHYGTPGNAIDASRIPGGSSSGAGVSVGEGTSDISIGSDTGGSIRIPASLNSVVGFKPT 177 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLAT-DAVPLAGLRFGVTEDF 179 ARRV L GA PLS TLDS GPLAR+V CA DA+++GE A A+ LAGLR GV Sbjct: 178 ARRVPLIGAFPLSGTLDSIGPLARTVAQCAATDAVMAGEAPAELAAISLAGLRVGVPRGV 237 Query: 180 VNDGMDDAVRAAFDAALARLQKAGA 204 + + V AAF+ L ++++AGA Sbjct: 238 LFGDTEGEVAAAFEHCLGKIEQAGA 262 >SMc03245 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Sme Sinorhizobium meliloti Length = 435 Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 110/205 (53%), Positives = 149/205 (72%), Gaps = 1/205 (0%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFD+ GE T AGS AP A ADA V RLR AGAV++G+++M+EFAF+ +GL Sbjct: 62 VSIKDLFDIAGEPTLAGSIIRRAAPPATADAAIVRRLRAAGAVIIGKSHMTEFAFTAVGL 121 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHY P N +D + + GGS+SG AVS A + +A+G+D+GGS+RIP+A GL GFKPT Sbjct: 122 NPHYPVPGNAIDPSLIPGGSSSGAAVSAAEGTSEIAIGSDSGGSVRIPAALQGLVGFKPT 181 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGET-LATDAVPLAGLRFGVTEDF 179 ARR+SL+GA PLS +LDS GPLAR+V CA ADA+++G+T + +PLAGL+ G+ E Sbjct: 182 ARRISLEGAFPLSPSLDSIGPLARTVAGCAAADAVMAGDTPRPLERMPLAGLKLGIPEGA 241 Query: 180 VNDGMDDAVRAAFDAALARLQKAGA 204 + +G+ + AAF+ +L +AGA Sbjct: 242 LLEGLAPEIAAAFERSLQAFSRAGA 266