BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0066.p (398 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1710 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 541 e-153 NMA1526 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 394 e-109 NMB1313 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 393 e-109 STM0447 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomeras... 291 1e-78 tig [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (t... 288 2e-77 >RSc1710 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Rso Ralstonia solanacearum Length = 449 Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust. Identities = 264/396 (66%), Positives = 321/396 (81%), Gaps = 2/396 (0%) Query: 1 MKMVAAQFGYQVETEVLNDKVGRAFNDIAVENNLRVAGYPKIEPKTSEGVAEGSLAFDAT 60 MKMV Q+G QVE EV DK R F DI E ++VAG P+ E K SEGVA+ AFDAT Sbjct: 51 MKMVEKQYGQQVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELK-SEGVADDQFAFDAT 109 Query: 61 FEIYPEVVLGDLASAEVEKTTSAVSDTEIDKTLDILRKQRVHYHVKGEQGAHGDGGEPVA 120 FE+YPEV +GDLA AE+ +T + ++D EIDKT+DILRKQRVHYH +GE G HGDGGE VA Sbjct: 110 FEVYPEVKIGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGDHGDGGEAVA 169 Query: 121 QNGDRATVDFVGKIDGVEFQGGKADAFPFVLGEGRMLPEFEAATLGLKVGESKTFPLAFP 180 QNGDR TVDFVG IDGVEF GGKA+ F FVLGEGRMLPEFE ATLGLK GESK FPLAFP Sbjct: 170 QNGDRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFP 229 Query: 181 ADYHGKDVAGKTAEFTITLKQLEWAHLPEVDAEFAKSLGIEDGDLTKMREDIKRNLEREV 240 ADYHGKDVAGKTAEFT+TLKQ+EWAHLPE++ FA+SLGI DG L KMR DI+ NLEREV Sbjct: 230 ADYHGKDVAGKTAEFTVTLKQVEWAHLPEINGAFAQSLGIADGSLDKMRADIRENLEREV 289 Query: 241 SARTKAKTKDSVMDALIKVSELEVPKALVEQDIERLIEMAHQDMQQRGM-DPKGMQLPRE 299 RT A KD VMDAL+KV+EL+VPK+L+EQD ERL+EMA +D++ RGM + K M +P E Sbjct: 290 KRRTHALLKDQVMDALLKVAELDVPKSLIEQDQERLVEMARRDLEARGMPNVKNMPIPAE 349 Query: 300 LFTAQAERRVRLGLILAEVVKTNKLEATEEQVKAQVEDFAQSYEDPQQVLKYYFSDRRRL 359 +F QAERRV+LGL+LAEVVK N LEA EQ+KA++E+FA+SYEDP++V+++Y+ D++RL Sbjct: 350 MFAQQAERRVKLGLVLAEVVKVNALEAKPEQIKAEIEEFAKSYEDPKEVIRWYYGDQQRL 409 Query: 360 AEVEALVLEENVVNYVLGKSKVSEKSVAFDALMGNQ 395 AE+EA VLE NVVN+V K+KV++K+++F+ L Q Sbjct: 410 AEMEAYVLENNVVNFVCDKAKVADKAMSFEELTATQ 445 >NMA1526 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) NmA Neisseria meningitidis Z2491 Length = 437 Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/401 (51%), Positives = 279/401 (69%), Gaps = 22/401 (5%) Query: 1 MKMVAAQFGYQVETEVLNDKVGRAFNDIAVENNLRVAGYPKIEPKTSEGVAEG----SLA 56 +KM+A +G + +V+N+ V R F+D+AV L+VAG+P+ E GV E S Sbjct: 52 LKMIAQMYGASAQNDVINELVQRRFHDVAVAQELKVAGFPRFE-----GVEEQDDKESFK 106 Query: 57 FDATFEIYPEVVLGDLASAEVEKTTSAVSDTEIDKTLDILRKQRVHY-HVKGEQGAHGDG 115 A FE++PEVV+GDL++ EVEK T++V D E+D+T++ILRKQR + HV+ E Sbjct: 107 VAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVERE------- 159 Query: 116 GEPVAQNGDRATVDFVGKIDGVEFQGGKADAFPFVLGEGRMLPEFEAATLGLKVGESKTF 175 A+NGDR +DF GKIDG F GG + + FVLG +MLPEFEA +G+K GESK Sbjct: 160 ----ARNGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDV 215 Query: 176 PLAFPADYHGKDVAGKTAEFTITLKQLEWAHLPEVDAEFAKSLGIEDGDLTKMREDIKRN 235 + FP DYHGKDVAGKTA FTITL + A LPEVDA+FAK+LGI DGD+ KMRE++K+N Sbjct: 216 TVNFPEDYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKN 275 Query: 236 LEREVSARTKAKTKDSVMDALIKVSELEVPKALVEQDIERLIEMAHQDMQQRGM-DPKGM 294 + REV R +TK+SVM+AL+K EL+ P ALV ++ RL Q+ +GM D + Sbjct: 276 VSREVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL 335 Query: 295 QLPRELFTAQAERRVRLGLILAEVVKTNKLEATEEQVKAQVEDFAQSYEDPQQVLKYYFS 354 LP ++F QAERRV LGLILA++V NKLE TEEQ+KA V +FA+SYEDPQ+V+ +Y++ Sbjct: 336 DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYA 395 Query: 355 DRRRLAEVEALVLEENVVNYVLGKSKVSEKSVAFDALMGNQ 395 + RL +L +E NVV++VLGK+KV+EK+++FD +MG Q Sbjct: 396 EPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQ 436 >NMB1313 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Nme Neisseria meningitidis MC58 Length = 437 Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/401 (51%), Positives = 278/401 (69%), Gaps = 22/401 (5%) Query: 1 MKMVAAQFGYQVETEVLNDKVGRAFNDIAVENNLRVAGYPKIEPKTSEGVAEG----SLA 56 +KM+A +G + +V+N+ V R F D+AV L+VAG+P+ E GV E S Sbjct: 52 LKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFE-----GVEEQDDKESFK 106 Query: 57 FDATFEIYPEVVLGDLASAEVEKTTSAVSDTEIDKTLDILRKQRVHY-HVKGEQGAHGDG 115 A FE++PEVV+GDL++ EVEK T++V D E+D+T++ILRKQR + HV+ E Sbjct: 107 VAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVERE------- 159 Query: 116 GEPVAQNGDRATVDFVGKIDGVEFQGGKADAFPFVLGEGRMLPEFEAATLGLKVGESKTF 175 A+NGDR +DF GKIDG F GG + + FVLG +MLPEFEA +G+K GESK Sbjct: 160 ----ARNGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDV 215 Query: 176 PLAFPADYHGKDVAGKTAEFTITLKQLEWAHLPEVDAEFAKSLGIEDGDLTKMREDIKRN 235 + FP DYHGKDVAGKTA FTITL + A LPEVDA+FAK+LGI DGD+ KMRE++++N Sbjct: 216 TVNFPEDYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKN 275 Query: 236 LEREVSARTKAKTKDSVMDALIKVSELEVPKALVEQDIERLIEMAHQDMQQRGM-DPKGM 294 + REV R +TK+SVM+AL+K EL+ P ALV ++ RL Q+ +GM D + Sbjct: 276 VSREVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL 335 Query: 295 QLPRELFTAQAERRVRLGLILAEVVKTNKLEATEEQVKAQVEDFAQSYEDPQQVLKYYFS 354 LP ++F QAERRV LGLILA++V NKLE TEEQ+KA V +FA+SYEDPQ+V+ +Y++ Sbjct: 336 DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYA 395 Query: 355 DRRRLAEVEALVLEENVVNYVLGKSKVSEKSVAFDALMGNQ 395 D RL +L +E NVV++VLGK+KV+EK+++FD +MG Q Sbjct: 396 DPSRLQAPTSLAVESNVVDFVLGKAKVNEKALSFDEVMGAQ 436 >STM0447 [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Sty Salmonella typhimurium LT2 Length = 432 Score = 291 bits (746), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 157/395 (39%), Positives = 239/395 (60%), Gaps = 14/395 (3%) Query: 1 MKMVAAQFGYQVETEVLNDKVGRAFNDIAVENNLRVAGYPKIEPKTSEGVAEGSLAFDAT 60 M +VA ++G V +VL D + R F D ++ + AG P P + V E + Sbjct: 51 MNIVAQRYGASVRQDVLGDLMSRNFVDAIIKEKINPAGAPNYVPGEYK-VGE-DFTYSVE 108 Query: 61 FEIYPEVVLGDLASAEVEKTTSAVSDTEIDKTLDILRKQRVHYHVKGEQGAHGDGGEPVA 120 FE+YPEV L L S EVEK V+D ++D LD LRKQ+ + K DG A Sbjct: 109 FEVYPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEK-------DGA---A 158 Query: 121 QNGDRATVDFVGKIDGVEFQGGKADAFPFVLGEGRMLPEFEAATLGLKVGESKTFPLAFP 180 DR T+DF G +DG EF+GGKA F +G+GRM+P FE G K GE T + FP Sbjct: 159 DAEDRVTIDFTGSVDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFP 218 Query: 181 ADYHGKDVAGKTAEFTITLKQLEWAHLPEVDAEFAKSLGIEDGDLTKMREDIKRNLEREV 240 +YH +++ GK A+F I LK++E LPE+ EF K G+EDG + +R ++++N+ERE+ Sbjct: 219 EEYHAENLKGKAAKFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMEREL 278 Query: 241 SARTKAKTKDSVMDALIKVSELEVPKALVEQDIERLIEMAHQDMQQRGMDPKGMQLPREL 300 + + K ++ L+K ++++VP AL++ +I+ L A Q G + + ++LPREL Sbjct: 279 KGAVRNRVKSQAIEGLVKANDIDVPSALIDSEIDVLRRQAAQRFG--GNEKQALELPREL 336 Query: 301 FTAQAERRVRLGLILAEVVKTNKLEATEEQVKAQVEDFAQSYEDPQQVLKYYFSDRRRLA 360 F QA+RRV +GL+L EV++TN+L+A EE+VK +E+ A +YEDP++V+++Y ++ + Sbjct: 337 FEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMD 396 Query: 361 EVEALVLEENVVNYVLGKSKVSEKSVAFDALMGNQ 395 + + LEE V VL K+KVSEK+ +F+ LM Q Sbjct: 397 NMRNVALEEQAVEAVLAKAKVSEKATSFNELMNQQ 431 >tig [O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) Eco Escherichia coli K12 Length = 432 Score = 288 bits (736), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 154/395 (38%), Positives = 237/395 (60%), Gaps = 14/395 (3%) Query: 1 MKMVAAQFGYQVETEVLNDKVGRAFNDIAVENNLRVAGYPKIEPKTSEGVAEGSLAFDAT 60 M +VA ++G V +VL D + R F D ++ + AG P P E + Sbjct: 51 MNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVP--GEYKLGEDFTYSVE 108 Query: 61 FEIYPEVVLGDLASAEVEKTTSAVSDTEIDKTLDILRKQRVHYHVKGEQGAHGDGGEPVA 120 FE+YPEV L L + EVEK V+D ++D LD LRKQ+ + K DG Sbjct: 109 FEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEK-------DGA---V 158 Query: 121 QNGDRATVDFVGKIDGVEFQGGKADAFPFVLGEGRMLPEFEAATLGLKVGESKTFPLAFP 180 + DR T+DF G +DG EF+GGKA F +G+GRM+P FE G K GE T + FP Sbjct: 159 EAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP 218 Query: 181 ADYHGKDVAGKTAEFTITLKQLEWAHLPEVDAEFAKSLGIEDGDLTKMREDIKRNLEREV 240 +YH +++ GK A+F I LK++E LPE+ AEF K G+EDG + +R ++++N+ERE+ Sbjct: 219 EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMEREL 278 Query: 241 SARTKAKTKDSVMDALIKVSELEVPKALVEQDIERLIEMAHQDMQQRGMDPKGMQLPREL 300 + + + K ++ L+K ++++VP AL++ +I+ L A Q G + + ++LPREL Sbjct: 279 KSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFG--GNEKQALELPREL 336 Query: 301 FTAQAERRVRLGLILAEVVKTNKLEATEEQVKAQVEDFAQSYEDPQQVLKYYFSDRRRLA 360 F QA+RRV +GL+L EV++TN+L+A EE+VK +E+ A +YEDP++V+++Y ++ + Sbjct: 337 FEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMD 396 Query: 361 EVEALVLEENVVNYVLGKSKVSEKSVAFDALMGNQ 395 + + LEE V VL K+KV+EK F+ LM Q Sbjct: 397 NMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQ 431