BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0037.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0398 [R] COG0457 FOG Rso Ralstonia solanacearum                     92   4e-19
PA4667 [R] COG0457 FOG Pae Pseudomonas aeruginosa                      85   4e-17
XF2647 [R] COG0457 FOG Xfa Xylella fastidiosa 9a5c                     79   3e-15
mlr7432 [R] COG0457 FOG Mlo Mesorhizobium loti                         74   6e-14
BMEI1531 [R] COG0457 FOG Bme Brucella melitensis                       66   2e-11

>RSc0398 [R] COG0457 FOG Rso Ralstonia solanacearum
          Length = 642

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 58/88 (65%)

Query: 1   VQLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEA 60
           V LAP+D +IADSLGW ++R G+L  A   LR+A+A  P  EIG HLGE+LW  GKQD+A
Sbjct: 547 VSLAPDDPYIADSLGWVKYRRGDLPAATDILRKAWAAAPQAEIGAHLGEVLWQSGKQDDA 606

Query: 61  KRLWREAQSKDPKNDVLKSTLDRLKVQL 88
           +++W EA   D  +  L+ TL R    L
Sbjct: 607 RKVWTEAAKLDINDTTLRETLHRFSQPL 634


>PA4667 [R] COG0457 FOG Pae Pseudomonas aeruginosa
          Length = 590

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 56/83 (67%)

Query: 2   QLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEAK 61
           +L P+D  I DS+GW  +R G L +AE+ LR+A    PD E+  HLGE+LW +G+Q +A+
Sbjct: 502 KLNPDDPAILDSMGWINYRQGKLADAERYLRQALQRYPDHEVAAHLGEVLWAQGRQGDAR 561

Query: 62  RLWREAQSKDPKNDVLKSTLDRL 84
            +WRE   K P +DVL+ T+ RL
Sbjct: 562 AIWREYLDKQPDSDVLRRTIKRL 584


>XF2647 [R] COG0457 FOG Xfa Xylella fastidiosa 9a5c
          Length = 559

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 55/80 (68%)

Query: 5   PEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRPDPEIGIHLGEILWTRGKQDEAKRLW 64
           P++  I DS GW  +RLG + EA  EL+RA++L  +PEI +H+GE+LW  G+++EA+  +
Sbjct: 478 PDNPSIIDSYGWVMYRLGRVKEALVELKRAWSLAKEPEIAVHVGEVLWADGQREEARYYF 537

Query: 65  REAQSKDPKNDVLKSTLDRL 84
            EA+  DP N VL+  L++ 
Sbjct: 538 EEARKLDPDNVVLRHVLEKF 557


>mlr7432 [R] COG0457 FOG Mlo Mesorhizobium loti
          Length = 629

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 1   VQLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRP-DPEIGIHLGEILWTRGKQDE 59
           V L P D +I DSLGWA FRLG  D+A +E+ RA +L+P DP +  HLG+  W  G++ E
Sbjct: 517 VDLRPSDGYIVDSLGWAYFRLGRFDDAVREMERAVSLKPEDPVLNDHLGDAYWRVGRKLE 576

Query: 60  AKRLWREAQSKDPKNDVLKSTLDRL 84
           A   W +A+   P  DVL +   +L
Sbjct: 577 ATFQWNQARDLKPDPDVLATLQQKL 601


>BMEI1531 [R] COG0457 FOG Bme Brucella melitensis
          Length = 593

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 1   VQLAPEDAFIADSLGWAEFRLGNLDEAEKELRRAYALRP-DPEIGIHLGEILWTRGKQDE 59
           V+L P+D +I DSLGWA ++LG  ++A  EL +A  LRP DP I  H+G+  W  G+  E
Sbjct: 458 VELRPQDGYIVDSLGWAYYQLGRYNDAVVELEKAVKLRPEDPTINDHMGDAYWRVGRLLE 517

Query: 60  AKRLWREAQSKDPKNDVLKSTLDRLK 85
           A   W  A +  P+ + L    ++LK
Sbjct: 518 ATFQWNHAIAGKPEPEELAKIKEKLK 543