BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0008.p (272 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll8086 [S] COG3496 Uncharacterized conserved protein Mlo Mesorh... 160 3e-39 AGc3600 [S] COG3496 Uncharacterized conserved protein Atu Agroba... 133 4e-31 CC2599 Non COG 115 8e-26 VC1121 [S] COG3496 Uncharacterized conserved protein Vch Vibrio ... 89 1e-17 MT0464 [S] COG3496 Uncharacterized conserved protein MtC Mycobac... 83 6e-16 >mll8086 [S] COG3496 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 272 Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 90/264 (34%), Positives = 133/264 (50%), Gaps = 11/264 (4%) Query: 4 PRAPAYIVRGQVMHERLRPAQHRFVYPVFYVRLNLARLSDANNAW--FGVDRLRLMSLRT 61 P + + G+VMH+RL+P +HR Y +F++ L+L + + +R L Sbjct: 3 PELKSALYAGKVMHQRLKPRRHRLSYRIFFLLLDLDEIDAMSKRLRLLSHNRFNLFGFAD 62 Query: 62 RDYGPRDGSDLDGWMRAQLADAGLPCD-GEIWLQTFPRLFGFVFNPVSFWLCHDSAGALR 120 D+G G L ++ L AG+ D G I L + PR+ G+ FNP+S + CH G L Sbjct: 63 ADHGDGSGGSLKAYVEDMLKTAGIETDAGPIRLLSMPRMLGYAFNPISIYFCHSRQGDLV 122 Query: 121 AVLAEVNNTFGETHRYLLADSERKAITPDTRLVCAKAMHVSPFCEVRGSYRFRFRDTATT 180 A+L EVNNTFG+ H YL+ ER T R C K +VSPF + +YRFR Sbjct: 123 AILYEVNNTFGQRHSYLIPVGERHDET--VRQHCDKRFYVSPFMAMGLNYRFRIGLPGEN 180 Query: 181 TLIGIDYDDGADNPDSAGVLIHTTVGGRLQAMTSAAALRALLTQPFLTFGIVAKIHWQAW 240 I I D G L+ + G+ +A++ A+ LRA ++ P LT + A IHW+A Sbjct: 181 VAIHITAS------DDQGPLMVASFAGKRRALSDASLLRAFISYPLLTLKVTAGIHWEAL 234 Query: 241 KLWCKRVPFFRKPVRPTDSAVATA 264 +LW K + +P P +S A Sbjct: 235 RLWAKGIRLQERPAPPHNSITHVA 258 >AGc3600 [S] COG3496 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 272 Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 93/264 (35%), Positives = 133/264 (50%), Gaps = 18/264 (6%) Query: 1 MTNPRAPAYIVRGQVMHERLRPAQHRFVYPVFYVRLNLARLSDA--NNAWFGVDRLRLMS 58 MT P A + G V H R +P H+ Y ++ + L+L L N +F VDR L S Sbjct: 1 MTPPLTSA-LFPGHVTHARFKPKTHKLAYRIYSLLLDLDELEMLDRNLRFFSVDRFNLFS 59 Query: 59 LRTRDYGPRDGSDLDGWMRAQLADAGLPCDG-EIWLQTFPRLFGFVFNPVSFWLCHDSAG 117 RD G L + + AG+ DG I L T PRL G+ FNP+S + C+ Sbjct: 60 FHRRDRGDGSAIGLRRQIETAMTAAGIAVDGGPIRLLTMPRLLGWAFNPLSVFFCYGRDM 119 Query: 118 ALRAVLAEVNNTFGETHRYLLADSERKAITPDTRLV--CAKAMHVSPFCEVRGSYRFRFR 175 +L+A+L EV+NTFG+ H YL+ I +T +V C KA +VSPF ++ Y FR Sbjct: 120 SLKAILWEVDNTFGQRHSYLIPVE----IGKETEIVQRCDKAFYVSPFMDMDLRYVFRVV 175 Query: 176 DTATTTLIGID-YDDGADNPDSAGVLIHTTVGGRLQAMTSAAALRALLTQPFLTFGIVAK 234 I I+ +DD G+++ GR +T A L+A T PFLT +V Sbjct: 176 PPGDRLKIVIETFDDD-------GIVLTARHLGRRVELTDGALLKAFATIPFLTLKVVLG 228 Query: 235 IHWQAWKLWCKRVPFFRKPVRPTD 258 IHW+A K+W K V ++P+ P + Sbjct: 229 IHWEALKIWLKGVRLKKRPLPPAE 252 >CC2599 Non COG Length = 257 Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 16/251 (6%) Query: 13 GQVMHERLRPAQHRFVYPVFYVRLNLARLS--DANNAWFGVDRLRLMSLRTRDYGPRDGS 70 G V+H+R RP +H Y VF + L+L + A F L+ RD+ + Sbjct: 10 GHVVHDRTRPKRHHLRYGVFMLLLDLDEVEALSARLRLFSRKAWNLIGFHDRDHLDDPKA 69 Query: 71 DLDGWMRAQLADAGLPCD-GEIWLQTFPRLFGFVFNPVSFWLCHDSAGALRAVLAEVNNT 129 L + A+LA GL I + T PR+ G FNP++ + CHD+ L A + V NT Sbjct: 70 SLKDEILAKLAAHGLAERVASIRVLTMPRILGKGFNPLTVFFCHDAQDRLVATVHAVRNT 129 Query: 130 FGETHRYLLADSERKAITPDTRLVCAKAMHVSPFCEVRGSYRFRFRDTATTTLIGIDYDD 189 FG+ H Y++ R + KA +VSPF + Y F R A +G+D Sbjct: 130 FGQRHDYVM--PARLGLDGWVEQEAGKAFYVSPFLPMNLRYDFETRPPAEAVSVGVDV-- 185 Query: 190 GADNPDSAGVLIHTTVGGRLQAMTSAAALRALLTQPFLTFGIVAKIHWQAWKLWCKRVPF 249 D AGV++ T G +++T A L+ALL P+ GI+ IHW+A K+ K + Sbjct: 186 ----LDEAGVILSATFAGERRSLTDGAILKALLGHPWQVAGILVAIHWEAIKIILKGFRY 241 Query: 250 FRKPVRPTDSA 260 + P D A Sbjct: 242 Y-----PQDKA 247 >VC1121 [S] COG3496 Uncharacterized conserved protein Vch Vibrio cholerae Length = 269 Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 77/270 (28%), Positives = 119/270 (44%), Gaps = 29/270 (10%) Query: 10 IVRGQVMHERLRPAQHRFVYPVFYVRLNLARLSD-ANNAW-FGVDRLRLMSLRTRDY--- 64 ++ GQV H R P +H YP+F ++L A+ W G R DY Sbjct: 14 LMVGQVRHRRFTPVEHALNYPLFMPCIDLDEWPQLADKVWGLGERWWHWARFRREDYLGQ 73 Query: 65 GPRDGSDLDGWMRAQLADAGLPCDGEIWLQTFPRLFGFVFNPVSFWLCHDSAGALRAVLA 124 GP + LD QL + G + R G F+PV+F+ +DS R +LA Sbjct: 74 GPLKQAVLDK--IEQLTGERIE-GGRVVALLHLRYLGIYFSPVNFYYVYDSEKRWRYLLA 130 Query: 125 EVNNT-FGETHRYLLADSERKAITPDTRLVC----AKAMHVSPFCEVRGSYRFRFRDTAT 179 EV+NT + E H Y A + A+T + V AKA HVSPF + Y ++ + Sbjct: 131 EVSNTPWNERHYY--AVPAQAALTSEEAAVIEWQHAKAFHVSPFNPIEQRYCWKIKPLTR 188 Query: 180 TTLIGIDYDDGADNPDSAGVLIHTTVGGRLQAMTSAAALRALLTQPFLTFGIVAKIHWQA 239 +I ++ D+ T+ + + ++++ L L+ P + +V I+W A Sbjct: 189 ALMIHLECHRSNKEFDA-------TLAMQAEPLSASNLLPRLIKTPIMAVKVVLGIYWHA 241 Query: 240 WKLWCKRVPFFRKPVRPTDSAVATANFNKE 269 +KLW K PF+ P + T N NKE Sbjct: 242 FKLWRKGAPFYAHPDQ-------TQNNNKE 264 >MT0464 [S] COG3496 Uncharacterized conserved protein MtC Mycobacterium tuberculosis CDC1551 Length = 243 Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 75/251 (29%), Positives = 106/251 (42%), Gaps = 16/251 (6%) Query: 1 MTNPRAPAYIVRGQVMHERLRPAQHRFVYPVFYVRLNLARLSDANNAWFGVDRLRLMSLR 60 +T PA I R + H R P H F Y + +++ L R Sbjct: 2 LTQTLTPA-IYRTTISHCRQVPVHHSFAYRSYSWYVDVDNLPQLPWWLRPFARFHADDHF 60 Query: 61 TRDYGPRDGSDLDGWMRAQLADAGLPC-DGEIWLQTFPRLFGFVFNPVSFWLCHDSAGAL 119 + S L + A A GL DG I R+ G+VFNP+S + CHD G L Sbjct: 61 ADPFSCPPHSSLRDRLDAFFAARGLAVPDGRITALLQARVLGYVFNPLSIFWCHDRDGQL 120 Query: 120 RAVLAEVNNTFGETHRYLLADSERKAITPDTRLVCAKAMHVSPFCEVRGSYRFRF--RDT 177 R V+AEV+NT+G H YLL + D +V AK +VSPF ++ G Y R D Sbjct: 121 RHVIAEVHNTYGGRHAYLLPPA-------DLPVVTAKNFYVSPFHQLAGYYLIRAPRPDR 173 Query: 178 ATTTLIGIDYDDGADNPDSAGVLIHTTVGGRLQAMTSAAALRALLTQPFLTFGIVAKIHW 237 + + D P+ L G R A T A+ +++ P + A+I Sbjct: 174 ELDVTVTLHRDRRQVCPEFTATL----RGQRRPATTRQIAMMQIIS-PLAPMVVAARIRI 228 Query: 238 QAWKLWCKRVP 248 Q +LW +RVP Sbjct: 229 QGIRLWLRRVP 239