BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0202.p         (55 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2446 [J] COG0267 Ribosomal protein L33 Rso Ralstonia solanace...    94   6e-20
YPO0051 [J] COG0267 Ribosomal protein L33 Ype Yersinia pestis          84   6e-17
rpmG [J] COG0267 Ribosomal protein L33 Eco Escherichia coli K12        84   9e-17
ZrpmG [J] COG0267 Ribosomal protein L33 EcZ Escherichia coli O15...    84   9e-17
STM3727 [J] COG0267 Ribosomal protein L33 Sty Salmonella typhimu...    84   9e-17

>RSc2446 [J] COG0267 Ribosomal protein L33 Rso Ralstonia solanacearum
          Length = 56

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 48/54 (88%)

Query: 2  AKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          +K GRDKIKLESTAGTGHFYTTTKNKRT PEK+ IMKFDP  RKHV YKETKIK
Sbjct: 3  SKGGRDKIKLESTAGTGHFYTTTKNKRTKPEKMEIMKFDPVARKHVAYKETKIK 56


>YPO0051 [J] COG0267 Ribosomal protein L33 Ype Yersinia pestis
          Length = 55

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 46/55 (83%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAK  R+KIKL S+AGTGHFYTTTKNKRT PEKL + KFDP VR+HV YKE KIK
Sbjct: 1  MAKGVREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVLYKEAKIK 55


>rpmG [J] COG0267 Ribosomal protein L33 Eco Escherichia coli K12
          Length = 55

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 46/55 (83%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAK  R+KIKL S+AGTGHFYTTTKNKRT PEKL + KFDP VR+HV YKE KIK
Sbjct: 1  MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55


>ZrpmG [J] COG0267 Ribosomal protein L33 EcZ Escherichia coli O157:H7
          EDL933
          Length = 55

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 46/55 (83%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAK  R+KIKL S+AGTGHFYTTTKNKRT PEKL + KFDP VR+HV YKE KIK
Sbjct: 1  MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55


>STM3727 [J] COG0267 Ribosomal protein L33 Sty Salmonella typhimurium LT2
          Length = 55

 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 42/55 (76%), Positives = 46/55 (83%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAK  R+KIKL S+AGTGHFYTTTKNKRT PEKL + KFDP VR+HV YKE KIK
Sbjct: 1  MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK 55