BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0184.p         (178 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0043 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid...   271   4e-73
YPO0106 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid...   241   8e-64
PM1749 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptida...   237   9e-63
HI0496 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptida...   236   3e-62
hslV [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase...   234   8e-62

>RSc0043 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           Rso Ralstonia solanacearum
          Length = 178

 Score =  271 bits (694), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 138/178 (77%), Positives = 162/178 (91%)

Query: 1   MEQFHGTTILSVRRGNTVALGGDGQVTLGNVVMKGTARKVRKLYNGKVLVGFAGGTADAF 60
           MEQ+HGTTI+SVRRGN VALGGDGQVTLGN+VMKGTARKVR +Y+GKVLVGFAG TADAF
Sbjct: 1   MEQYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAF 60

Query: 61  TLLDLFESKLEKHQGNLMRASVELAKEWRTDRMLRRLEAMLLTADRDTTLVITGNGDVLE 120
           +LLD FE+KL+K+QG+L+RA+V+LAK+WRTDR LR LEAML+ ADR++TLVITGNGDVL+
Sbjct: 61  SLLDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLD 120

Query: 121 PTDGIGAIGSGGTFAQSAAKALQENTELSPADIVKKSLVIAGELCIYTNLNHIIETLD 178
           P  GI AIGSGG +AQSAAKAL ENTEL+P D+V+KSL IAGELCIYTN N +IETL+
Sbjct: 121 PEGGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178


>YPO0106 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           Ype Yersinia pestis
          Length = 174

 Score =  241 bits (614), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 118/171 (69%), Positives = 140/171 (81%)

Query: 7   TTILSVRRGNTVALGGDGQVTLGNVVMKGTARKVRKLYNGKVLVGFAGGTADAFTLLDLF 66
           TTI+SVRR   V +GGDGQVTLGN VMKG A+KVR+LYN KV+ GFAGGTADAFTL +LF
Sbjct: 2   TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 67  ESKLEKHQGNLMRASVELAKEWRTDRMLRRLEAMLLTADRDTTLVITGNGDVLEPTDGIG 126
           E KLE HQG+L +A+VELAK+WRTDRMLR+LEA+L  AD   +L+ITGNGDV++P D + 
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 127 AIGSGGTFAQSAAKALQENTELSPADIVKKSLVIAGELCIYTNLNHIIETL 177
           AIGSGG +AQSAA+AL ENTEL   DIV+KSL IAG++CIYTN    IE L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172


>PM1749 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           Pmu Pasteurella multocida
          Length = 176

 Score =  237 bits (605), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 118/172 (68%), Positives = 142/172 (82%), Gaps = 1/172 (0%)

Query: 7   TTILSVRRGNTVALGGDGQVTLGNVVMKGTARKVRKLYNGKVLVGFAGGTADAFTLLDLF 66
           TTI+SVRR   V +GGDGQV+LGN VMKG ARKVR+LYNGKVL GFAGGTADAFTL +LF
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 67  ESKLEKHQGNLMRASVELAKEWRTDRMLRRLEAMLLTADRDTTLVITGNGDVLEP-TDGI 125
           E KLE HQG+L++++VELAK+WRTDR LR+LEAML+ AD   +L+ITG GDV++P  D I
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121

Query: 126 GAIGSGGTFAQSAAKALQENTELSPADIVKKSLVIAGELCIYTNLNHIIETL 177
            AIGSGG FA SAA+AL ENTELS  +IV+KSL IAG++C+YTN +  IE L
Sbjct: 122 LAIGSGGNFALSAARALVENTELSAREIVEKSLKIAGDICVYTNTHFTIEEL 173


>HI0496 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           Hin Haemophilus influenzae
          Length = 175

 Score =  236 bits (601), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 117/172 (68%), Positives = 142/172 (82%), Gaps = 1/172 (0%)

Query: 7   TTILSVRRGNTVALGGDGQVTLGNVVMKGTARKVRKLYNGKVLVGFAGGTADAFTLLDLF 66
           TTI+SVRR   V +GGDGQV+LGN VMKG ARKVR+LYNGKVL GFAGGTADAFTL +LF
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 67  ESKLEKHQGNLMRASVELAKEWRTDRMLRRLEAMLLTADRDTTLVITGNGDVLEP-TDGI 125
           E KLE HQG+L++++VELAK+WRTDR LR+LEAML+ AD   +L+ITG GDV++P  D I
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 126 GAIGSGGTFAQSAAKALQENTELSPADIVKKSLVIAGELCIYTNLNHIIETL 177
            AIGSGG +A SAA+AL ENTELS  +IV+KSL IAG++C++TN N  IE L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173


>hslV [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           Eco Escherichia coli K12
          Length = 176

 Score =  234 bits (596), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 112/171 (65%), Positives = 139/171 (81%)

Query: 7   TTILSVRRGNTVALGGDGQVTLGNVVMKGTARKVRKLYNGKVLVGFAGGTADAFTLLDLF 66
           TTI+SVRR   V + GDGQ TLGN VMKG  +KVR+LYN KV+ GFAGGTADAFTL +LF
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 67  ESKLEKHQGNLMRASVELAKEWRTDRMLRRLEAMLLTADRDTTLVITGNGDVLEPTDGIG 126
           E KLE HQG+L++A+VELAK+WRTDRMLR+LEA+L  AD   +L+ITGNGDV++P + + 
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 127 AIGSGGTFAQSAAKALQENTELSPADIVKKSLVIAGELCIYTNLNHIIETL 177
           AIGSGG +AQ+AA+AL ENTELS  +I +K+L IAG++CIYTN  H IE L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172