BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0111.p         (82 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0731 [R] COG0824 Predicted thioesterase Rso Ralstonia solanac...    72   4e-13
PA0968 [R] COG0824 Predicted thioesterase Pae Pseudomonas aerugi...    62   2e-10
ybgC [R] COG0824 Predicted thioesterase Eco Escherichia coli K12       61   7e-10
ZybgC [R] COG0824 Predicted thioesterase EcZ Escherichia coli O1...    61   7e-10
ECs0771 [R] COG0824 Predicted thioesterase Ecs Escherichia coli ...    61   7e-10

>RSc0731 [R] COG0824 Predicted thioesterase Rso Ralstonia solanacearum
          Length = 134

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 4/79 (5%)

Query: 1   VVKNTAVDYFAPARLDDELKLTVVVEQFRNASMSFVQEAWRLQGTEQTLLARGQIKIACV 60
           VV++TAVDY APARLDD L++   +E+   AS+ F QE+WR       LL  G I++ CV
Sbjct: 57  VVRSTAVDYRAPARLDDLLQVRSRMERVGPASVQFAQESWR----GDILLVSGTIRVGCV 112

Query: 61  NAANFRPQAIPEEMLARLK 79
           +   FRP  IP  +LA +K
Sbjct: 113 DRLTFRPTPIPAPILATIK 131


>PA0968 [R] COG0824 Predicted thioesterase Pae Pseudomonas aeruginosa
          Length = 148

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)

Query: 1   VVKNTAVDYFAPARLDDELKLTVVVEQFRNASMSFVQEAWRLQGTEQTLLARGQIKIACV 60
           VV +    Y APA+LDDEL ++  VE+   AS+ F Q+  R   ++  LL  G+  +ACV
Sbjct: 62  VVHSAEARYHAPAKLDDELLVSAEVEELNRASLKFRQQVRR--ASDSVLLCEGRFLVACV 119

Query: 61  NAANFRPQAIPEEMLARLKGN 81
            A   +P+AIPE + A   G+
Sbjct: 120 RADTLKPRAIPETLRAAFAGS 140


>ybgC [R] COG0824 Predicted thioesterase Eco Escherichia coli K12
          Length = 134

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 1   VVKNTAVDYFAPARLDDELKLTVVVEQFRNASMSFVQEAWRLQGTEQTLLARGQIKIACV 60
           VV+   V+Y+APARLDD L++   +   R  S+ F Q   R+   E TLL   ++ + CV
Sbjct: 58  VVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQ---RIVNAENTLLNEAEVLVVCV 114

Query: 61  NAANFRPQAIPEEMLARLK 79
           +    +P+A+P+ ++A  K
Sbjct: 115 DPLKMKPRALPKSIVAEFK 133


>ZybgC [R] COG0824 Predicted thioesterase EcZ Escherichia coli O157:H7
           EDL933
          Length = 134

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 1   VVKNTAVDYFAPARLDDELKLTVVVEQFRNASMSFVQEAWRLQGTEQTLLARGQIKIACV 60
           VV+   V+Y+APARLDD L++   +   R  S+ F Q   R+   E TLL   ++ + CV
Sbjct: 58  VVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQ---RIVNAENTLLNEAEVLVVCV 114

Query: 61  NAANFRPQAIPEEMLARLK 79
           +    +P+A+P+ ++A  K
Sbjct: 115 DPLKMKPRALPKSIVAEFK 133


>ECs0771 [R] COG0824 Predicted thioesterase Ecs Escherichia coli O157:H7
          Length = 134

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 1   VVKNTAVDYFAPARLDDELKLTVVVEQFRNASMSFVQEAWRLQGTEQTLLARGQIKIACV 60
           VV+   V+Y+APARLDD L++   +   R  S+ F Q   R+   E TLL   ++ + CV
Sbjct: 58  VVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQ---RIVNAENTLLNEAEVLVVCV 114

Query: 61  NAANFRPQAIPEEMLARLK 79
           +    +P+A+P+ ++A  K
Sbjct: 115 DPLKMKPRALPKSIVAEFK 133