BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0038.p (1080 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1251 [L] COG1643 HrpA-like helicases Rso Ralstonia solanacearum 1399 0.0 YPO2322 [L] COG1643 HrpA-like helicases Ype Yersinia pestis 803 0.0 STM1641 [L] COG1643 HrpA-like helicases Sty Salmonella typhimuri... 799 0.0 hrpA [L] COG1643 HrpA-like helicases Eco Escherichia coli K12 787 0.0 ZhrpA [L] COG1643 HrpA-like helicases EcZ Escherichia coli O157:... 786 0.0 >RSc1251 [L] COG1643 HrpA-like helicases Rso Ralstonia solanacearum Length = 1331 Score = 1399 bits (3622), Expect = 0.0, Method: Compositional matrix adjust. Identities = 701/1025 (68%), Positives = 820/1025 (80%), Gaps = 28/1025 (2%) Query: 2 DAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQERV 61 D +VDAVDELAR G+GDVL+FLPGEREIR+AAEALRKHHP H EILPLFARLS QEQERV Sbjct: 278 DGIVDAVDELAREGAGDVLIFLPGEREIREAAEALRKHHPAHTEILPLFARLSVQEQERV 337 Query: 62 FKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAANQ 121 F+ SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIE V+Q+AANQ Sbjct: 338 FRPSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVSQAAANQ 397 Query: 122 RAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFIE 181 RAGRCGRVA GVCIRLY+E D++ RP+FT+PEILRSSLA+VILRMK+L L DVE FPFIE Sbjct: 398 RAGRCGRVADGVCIRLYEEADFIARPRFTDPEILRSSLAAVILRMKALRLTDVEQFPFIE 457 Query: 182 PPLGRAIADGYQLLQELGAVDEFNQLTPLGNQLAKLPLDPRVGRMILAGRENACLSELLI 241 PPLGRAIADGYQLLQELGAVD+ N LTPLG Q+A+LPLDPRV RMILAGR++ CL E+LI Sbjct: 458 PPLGRAIADGYQLLQELGAVDDENALTPLGKQVARLPLDPRVARMILAGRDHQCLREMLI 517 Query: 242 IASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSNRQLQD 301 IASALSVQDPRDRP E Q ADQAH++FADEKSEF ++++WKWFEEAV HKKSN+QLQD Sbjct: 518 IASALSVQDPRDRPQELQQQADQAHRQFADEKSEFLGWVKLWKWFEEAVAHKKSNKQLQD 577 Query: 302 HCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNVGFKSD 361 CRA+FLS LRLREWRDVHSQL T V EQGW++NE+ TYEQLH ALLTGLLGN+G + + Sbjct: 578 QCRAHFLSHLRLREWRDVHSQLHTTVAEQGWKLNESEPTYEQLHLALLTGLLGNIGVRIE 637 Query: 362 EDP----HYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLERI 417 E YLGARGIKF +WPGS++ +KAGKW+VA EL++TSRL+ R +A+I+PEW+E++ Sbjct: 638 EADGKGREYLGARGIKFFLWPGSAIARKAGKWMVAGELIETSRLFGRTLARIEPEWVEKV 697 Query: 418 GGHLLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALV 477 G HLLK SW +P WEK++ QV A ER TLYGL VY QRR++FG + P+EARE+FIR ALV Sbjct: 698 GAHLLKVSWSDPHWEKKAGQVMAFERGTLYGLPVYQQRRVHFGPMQPREARELFIRRALV 757 Query: 478 GGDFDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFEK 537 G+F+TR PFFAHNQ+LVREIENLEHKSRR DVLVDDELI AFYD IPADI N + FE Sbjct: 758 DGEFETRLPFFAHNQRLVREIENLEHKSRRQDVLVDDELIHAFYDSQIPADIHNTVAFEG 817 Query: 538 WHKDATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRDG 597 W+ A AA A KLL+LNRDDLMRHEAAG+TT+LFPKT+ +AG+ M L+YHFEPG+PRDG Sbjct: 818 WY--AEAAKASQKLLYLNRDDLMRHEAAGITTDLFPKTLPIAGIDMGLTYHFEPGSPRDG 875 Query: 598 VTLTVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARME 657 VTLTVPLYALNQV A R EWLVPGMLKEK HLLLKSLPQKLRRHCVPLPDYAAGF +R+ Sbjct: 876 VTLTVPLYALNQVPAQRAEWLVPGMLKEKAHLLLKSLPQKLRRHCVPLPDYAAGFVSRVR 935 Query: 658 ERHLFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRNL 717 G GDL+D LIAD+REQ +K DFK ETLPAHH MNFK++DEHGRQL+MGRNL Sbjct: 936 ----LGDGDLLDRLIADVREQTGTPLKRADFKLETLPAHHFMNFKVIDEHGRQLDMGRNL 991 Query: 718 GSLQAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASAASVS 777 L+AE GG+A++ FQ +A + A A A A+P G AP A+ + Sbjct: 992 AQLRAELGGRAQQTFQSIAAKDAAV-----AGAPGDGAGARPGKGGKPDAP-----ANPA 1041 Query: 778 EYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPADAAR 837 Y LT W FGELPELLE+++G SQTL G+PALVD HCD+EVFDDPA+AAR Sbjct: 1042 LYSGLTTWNFGELPELLEVRKG--------SQTLFGYPALVDGGDHCDVEVFDDPAEAAR 1093 Query: 838 QHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFMQE 897 H GLRRLFALQL+E LKY EKNIPGL QM +QFM LG+Q+ELR+QIL A L+RA +Q+ Sbjct: 1094 IHRLGLRRLFALQLREPLKYLEKNIPGLSQMAIQFMTLGAQDELRNQILDAALDRACLQD 1153 Query: 898 PLPKNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQTIKAHAQASADIQS 957 PLP + F RK+EG+ R LL EIARLAG +LAEY LP+KLQ K A ADI + Sbjct: 1154 PLPADDAGFGARKDEGRTRLTLLAQEIARLAGAILAEYAQLPRKLQIAKPFGAAYADIDA 1213 Query: 958 QLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAAPWQRA 1017 QL+ L+ KRFI + Y L HFPRYLK I +R++KL+ADPTRD + + E + +QRA Sbjct: 1214 QLKALMHKRFIEATPYAQLAHFPRYLKGIAMRIDKLKADPTRDTQRMQEMAPLFQQYQRA 1273 Query: 1018 QXRGR 1022 + + R Sbjct: 1274 EKQLR 1278 >YPO2322 [L] COG1643 HrpA-like helicases Ype Yersinia pestis Length = 1280 Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/1024 (41%), Positives = 632/1024 (61%), Gaps = 61/1024 (5%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 + A+ DAVDEL R +GD+L+F+ GEREIRD A+AL K + PH E+LPL+ARLS EQ R Sbjct: 256 LQAIFDAVDELGRESAGDILIFMSGEREIRDTADALIKQNLPHTEVLPLYARLSNSEQNR 315 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VF+S + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYS+R KV++L IE ++Q++AN Sbjct: 316 VFQSHHGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSFRTKVQRLPIEPISQASAN 375 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QR GRCGRV+ G+CIRLY EQD+L RP+FT+PEILR++LASVIL+M SL L D+ FPF+ Sbjct: 376 QRKGRCGRVSDGICIRLYSEQDFLSRPEFTDPEILRTNLASVILQMTSLGLGDIAAFPFV 435 Query: 181 EPPLGRAIADGYQLLQELGAV----DEFNQLTPLGNQLAKLPLDPRVGRMILAGRENACL 236 E P R I DG +LL+ELGA+ + QLTPLG QLA+LP+DPR+ RM+L +++ C+ Sbjct: 436 EAPDKRNIQDGVRLLEELGAIQTASNGHQQLTPLGRQLAQLPVDPRLARMVLQAQKSGCV 495 Query: 237 SELLIIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSN 296 EL+II SALS+QDPR+RP++ Q A+D+ H++FAD+ S+F +++ +W + +E + S+ Sbjct: 496 RELMIITSALSIQDPRERPVDKQQASDEKHRRFADKDSDFLAFVNLWDYLKEQ-QKALSS 554 Query: 297 RQLQDHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNV 356 Q + CR+++L+ LR+REW+D+++QL +V+E G +N A Y +HTA+LTGLL ++ Sbjct: 555 AQFRKLCRSDYLNYLRVREWQDIYTQLRQVVKELGIPVNSVAADYRSVHTAILTGLLSHI 614 Query: 357 GFKSDEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLER 416 G K E + GAR +F I+PGS L KK KW++ AELV+TSRL+ R A+I+PEW+E Sbjct: 615 GQKDVEKQEFTGARNARFAIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIEPEWIEP 674 Query: 417 IGGHLLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDAL 476 + HL+K + +P WEK V ASE+ TL+GL + ++R+IN+G I+P RE+FIR L Sbjct: 675 LAQHLVKHHYSDPHWEKAQGAVMASEKVTLFGLPIVTERKINYGPIDPLLCRELFIRHGL 734 Query: 477 VGGDFDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFE 536 V GD+ TR FF N KL+ E+E LEHKSRR D+LVDDE + FYD+ I D+ + + F+ Sbjct: 735 VEGDWQTRHAFFRMNLKLLAEVEELEHKSRRRDILVDDETLFNFYDQRIGRDVISALHFD 794 Query: 537 KWHKDATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRD 596 W K A+ P+LL + L++ A V +P L + L Y FEPGT D Sbjct: 795 SWWKQASQTK--PELLNFEKTMLIKEGANKVNPLDYPNFWYQGELKLRLFYQFEPGTDAD 852 Query: 597 GVTLTVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARM 656 GVT+ +PL LNQ+ +W +PG+ +E V L+KSLP+ +RR+ VP P+YA F AR+ Sbjct: 853 GVTVHIPLPILNQIHEQGFDWQIPGIRRELVIALIKSLPKPVRRNFVPAPNYADAFLARV 912 Query: 657 EERHLFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRN 716 + L++AL ++R + V ++ + +P H + F+++D+ R L G++ Sbjct: 913 TPL----ETGLLEALERELRRMTGVTVSRDSWQLDQVPDHLKITFRVLDDKNRILREGKD 968 Query: 717 LGSLQAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASAASV 776 L +L+ Q +E+ Q+ A GI Sbjct: 969 LAALKL----QLQEKVQETLSAVADDGI-------------------------------- 992 Query: 777 SEYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPADAA 836 E NL W+FG+LP E +RG + +PALVD+K + +FD + Sbjct: 993 -EQNNLHIWSFGDLPICYEQRRGGY--------EVKAYPALVDEKDSVAIRLFDTESQQQ 1043 Query: 837 RQHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFMQ 896 + + G RRL L + +KY + +P ++G+ F G+ +L D ++ G+++ Q Sbjct: 1044 QAMWQGTRRLLLLNIPSPIKYLHEKLPNKSKLGLYFNTYGNVMDLIDDCIACGVDKLVAQ 1103 Query: 897 E--PLPKNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQ--TIKAHAQAS 952 P+ + AD F R +E+ +A V +IA+ +L +++ K+L+ + A Sbjct: 1104 HGGPVWQEAD-FARLQEKVRAELNDTVVDIAKQVEQILTLVFSINKRLKGRIDISLVLAL 1162 Query: 953 ADIQSQLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAA 1012 +DI++QL L+ + F+ + + L RYLKAI RLEKL DP RD + V Sbjct: 1163 SDIKAQLAGLIYRGFVTSNGWKRLPDTLRYLKAIERRLEKLAVDPHRDRAQMLRIEHVQQ 1222 Query: 1013 PWQR 1016 WQ+ Sbjct: 1223 VWQQ 1226 >STM1641 [L] COG1643 HrpA-like helicases Sty Salmonella typhimurium LT2 Length = 1300 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/1024 (41%), Positives = 623/1024 (60%), Gaps = 60/1024 (5%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 + A+ DAVDEL R GD+L+F+ GEREIRD A+AL K + H E+LPL+ARLS EQ R Sbjct: 275 LQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNR 334 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VF+S + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IE ++Q++AN Sbjct: 335 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 394 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QR GRCGRV+ G+CIRLY E D+L RP+FT+PEILR++LASVIL+M +L L D+ FPF+ Sbjct: 395 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 454 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQ-----LTPLGNQLAKLPLDPRVGRMILAGRENAC 235 E P R I DG +LL+ELGA+ Q LTPLG QL++LP+DPR+ RM+L +++ C Sbjct: 455 EAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 514 Query: 236 LSELLIIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKS 295 + E +II SALS+QDPR+RP++ Q A+D+ H++F D++S+F +++ +W + E + S Sbjct: 515 VREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 574 Query: 296 NRQLQDHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGN 355 N Q + CR ++L+ LR+REW+D+++QL +V+E G +N PA Y ++H ALLTGLL + Sbjct: 575 N-QFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSH 633 Query: 356 VGFKSDEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLE 415 +G K + Y GAR +F I+PGS L KK KW + AELV+TSRL+ R A+I+PEW+E Sbjct: 634 IGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVE 693 Query: 416 RIGGHLLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDA 475 + HL+K+S+ EP WE+ V A+E+ T+YGL + + R++N+ I+P RE+FIR A Sbjct: 694 PVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHA 753 Query: 476 LVGGDFDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITF 535 LV GD+ TR FF N KL E+E LEHKSRR D+LVDD+ + FYD+ I D+ + F Sbjct: 754 LVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHF 813 Query: 536 EKWHKDATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPR 595 + W K + P LL + L++ A ++ +P L + LSY FEPG Sbjct: 814 DSWWKKISRET--PDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADA 871 Query: 596 DGVTLTVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCAR 655 DGVT+ +PL LNQV + EW +PG+ +E V L+KSLP+ +RR+ VP P+YA F R Sbjct: 872 DGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGR 931 Query: 656 MEERHLFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGR 715 + L L+DAL ++R + V D+ + +P H + F++V++ ++L+ GR Sbjct: 932 VTPLEL----PLLDALERELRRMTGVTVDREDWHWDQVPEHLKITFRVVNDKNKKLQEGR 987 Query: 716 NLGSLQAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASAAS 775 +L L+ G+ +E +A+ GI Sbjct: 988 SLAELKNALKGKVQETLSAVADD----GI------------------------------- 1012 Query: 776 VSEYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPADA 835 E L W+FGELPE E +RG + + +PALVD++ +++FD+P + Sbjct: 1013 --EQSGLHIWSFGELPESYEQKRG--------NYKVKAWPALVDERDSVAIKLFDNPLEQ 1062 Query: 836 ARQHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFM 895 + + GLRRL L + +KY + +P ++G+ F G EL D ++ G+++ Sbjct: 1063 QQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLID 1122 Query: 896 QEPLPKNADE-FNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQ--TIKAHAQAS 952 P ++ F E+ +A V +IA+ +L + + K+L+ + A Sbjct: 1123 ANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGL 1182 Query: 953 ADIQSQLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAA 1012 +DI++Q+ LV + F+ + + L RYL+AI RLEKL DP RD + + V Sbjct: 1183 SDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQ 1242 Query: 1013 PWQR 1016 WQ+ Sbjct: 1243 AWQQ 1246 >hrpA [L] COG1643 HrpA-like helicases Eco Escherichia coli K12 Length = 1281 Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/1026 (41%), Positives = 625/1026 (60%), Gaps = 64/1026 (6%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 + A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H EILPL+ARLS EQ R Sbjct: 256 LQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR 315 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VF+S + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IE ++Q++AN Sbjct: 316 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 375 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QR GRCGRV+ G+CIRLY E D+L RP+FT+PEILR++LASVIL+M +L L D+ FPF+ Sbjct: 376 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 435 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQ-----LTPLGNQLAKLPLDPRVGRMILAGRENAC 235 E P R I DG +LL+ELGA+ Q LTPLG QL++LP+DPR+ RM+L +++ C Sbjct: 436 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 495 Query: 236 LSELLIIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKS 295 + E +II SALS+QDPR+RPM+ Q A+D+ H++F D++S+F +++ +W + E + S Sbjct: 496 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 555 Query: 296 N--RQLQDHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLL 353 N R+L CR ++L+ LR+REW+D+++QL +V+E G +N PA Y ++H ALLTGLL Sbjct: 556 NAFRRL---CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLL 612 Query: 354 GNVGFKSDEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEW 413 ++G K + Y GAR +F I+PGS L KK KW++ AELV+TSRL+ R A+I PEW Sbjct: 613 SHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEW 672 Query: 414 LERIGGHLLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIR 473 +E + HL+K+++ EP WE+ V A+E+ T+YGL + + R++N+ I+P RE+FIR Sbjct: 673 VEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIR 732 Query: 474 DALVGGDFDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGI 533 ALV GD+ TR FF N KL E+E LEHKSRR D+LVDDE + FYD+ I D+ + Sbjct: 733 HALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISAR 792 Query: 534 TFEKWHKDATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGT 593 F+ W K + P LL + L++ A ++ +P L + LSY FEPG Sbjct: 793 HFDSWWKKVSRET--PDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA 850 Query: 594 PRDGVTLTVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFC 653 DGVT+ +PL LNQV + EW +PG+ +E V L+KSLP+ +RR+ VP P+YA F Sbjct: 851 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 910 Query: 654 ARMEERHLFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEM 713 R++ L L+D+L ++R + V D+ + +P H + F++VD+ ++L+ Sbjct: 911 GRVKPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 966 Query: 714 GRNLGSLQAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASA 773 GR+L L+ G+ +E +A+ GI Sbjct: 967 GRSLQDLKDALKGKVQETLSAVADD----GI----------------------------- 993 Query: 774 ASVSEYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPA 833 E L W+FG+LPE E +RG + + +PALVD++ +++FD+P Sbjct: 994 ----EQSGLHIWSFGQLPESYEQKRG--------NYKVKAWPALVDERDSVAIKLFDNPL 1041 Query: 834 DAARQHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERA 893 + + + GLRRL L + +KY + +P ++G+ F G EL D +S G+++ Sbjct: 1042 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKL 1101 Query: 894 FMQEPLPKNADE-FNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQ--TIKAHAQ 950 P +E F E+ +A V +IA+ +L + + K+L+ A Sbjct: 1102 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMAL 1161 Query: 951 ASADIQSQLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQV 1010 +DI++Q+ LV + F+ + + L RYL+AI RLEKL DP RD + + V Sbjct: 1162 GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENV 1221 Query: 1011 AAPWQR 1016 WQ+ Sbjct: 1222 QQAWQQ 1227 >ZhrpA [L] COG1643 HrpA-like helicases EcZ Escherichia coli O157:H7 EDL933 Length = 1281 Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/1026 (41%), Positives = 624/1026 (60%), Gaps = 64/1026 (6%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 + A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H EILPL+ARLS EQ R Sbjct: 256 LQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR 315 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VF+S + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR KV++L IE ++Q++AN Sbjct: 316 VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN 375 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QR GRCGRV+ G+CIRLY E D+L RP+FT+PEILR++LASVIL+M +L L D+ FPF+ Sbjct: 376 QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFV 435 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQ-----LTPLGNQLAKLPLDPRVGRMILAGRENAC 235 E P R I DG +LL+ELGA+ Q LTPLG QL++LP+DPR+ RM+L +++ C Sbjct: 436 EAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGC 495 Query: 236 LSELLIIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKS 295 + E +II SALS+QDPR+RPM+ Q A+D+ H++F D++S+F +++ +W + E + S Sbjct: 496 VREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSS 555 Query: 296 N--RQLQDHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLL 353 N R+L CR ++L+ LR+REW+D+++QL +V+E G +N PA Y ++H ALLTGLL Sbjct: 556 NAFRRL---CRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLL 612 Query: 354 GNVGFKSDEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEW 413 ++G K + Y GAR +F I+PGS L KK KW++ AELV+TSRL+ R A+I PEW Sbjct: 613 SHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEW 672 Query: 414 LERIGGHLLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIR 473 +E + HL+K+++ EP WE+ V A+E+ T+YGL + + R++N+ I+P RE+FIR Sbjct: 673 VEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIR 732 Query: 474 DALVGGDFDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGI 533 ALV GD+ TR FF N KL E+E LEHKSRR D+LVDDE + FYD+ I D+ + Sbjct: 733 HALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRIGHDVISAR 792 Query: 534 TFEKWHKDATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGT 593 F+ W K + P LL + L++ A ++ +P L + LSY FEPG Sbjct: 793 HFDSWWKKVSRET--PDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGA 850 Query: 594 PRDGVTLTVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFC 653 DGVT+ +PL LNQV + EW +PG+ +E V L+KSLP+ +RR+ VP P+YA F Sbjct: 851 DADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFL 910 Query: 654 ARMEERHLFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEM 713 R+ L L+D+L ++R + V D+ + +P H + F++VD+ ++L+ Sbjct: 911 GRVTPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKE 966 Query: 714 GRNLGSLQAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASA 773 GR+L L+ G+ +E +A+ GI Sbjct: 967 GRSLQDLKDALKGKVQETLSAVADD----GI----------------------------- 993 Query: 774 ASVSEYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPA 833 E L W+FG+LPE E +RG + + +PALVD++ +++FD+P Sbjct: 994 ----EQSGLHIWSFGQLPESYEQKRG--------NYKVKAWPALVDERDSVAIKLFDNPL 1041 Query: 834 DAARQHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERA 893 + + + GLRRL L + +KY + +P ++G+ F G EL D +S G+++ Sbjct: 1042 EQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQL 1101 Query: 894 FMQEPLPKNADE-FNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQ--TIKAHAQ 950 P +E F E+ +A V +IA+ +L + + K+L+ A Sbjct: 1102 IDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMAL 1161 Query: 951 ASADIQSQLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQV 1010 +DI++Q+ LV + F+ + + L RYL+AI RLEKL DP RD + + V Sbjct: 1162 GLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENV 1221 Query: 1011 AAPWQR 1016 WQ+ Sbjct: 1222 QQAWQQ 1227