BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0037.p         (188 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2366 [F] COG0717 Deoxycytidine deaminase Rso Ralstonia solana...   370   e-103
NMB0849 [F] COG0717 Deoxycytidine deaminase Nme Neisseria mening...   343   2e-94
NMA1060 [F] COG0717 Deoxycytidine deaminase NmA Neisseria mening...   343   2e-94
PA3480 [F] COG0717 Deoxycytidine deaminase Pae Pseudomonas aerug...   325   5e-89
XF0762 [F] COG0717 Deoxycytidine deaminase Xfa Xylella fastidios...   319   2e-87

>RSc2366 [F] COG0717 Deoxycytidine deaminase Rso Ralstonia solanacearum
          Length = 188

 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/188 (93%), Positives = 184/188 (97%)

Query: 1   MAIKSDKWIRRMAESEGMIEPFEPGQVREANGQKIVSYGTSSYGYDIRCANEFKIFTNIN 60
           M+IKSDKWIRRMAE  GMIEPFEPGQVREA+G++IVSYGTSSYGYDIRCA+EFKIFTNIN
Sbjct: 1   MSIKSDKWIRRMAEQHGMIEPFEPGQVREADGRRIVSYGTSSYGYDIRCADEFKIFTNIN 60

Query: 61  STIVDPKNFDEKSFVDFHGDVCIIPPNSFALARTVEYFRIPRSVLTICLGKSTYARCGII 120
           STIVDPKNFDEKSFVDF GDVCIIPPNSFALART+EYFRIPR+VLT+CLGKSTYARCGII
Sbjct: 61  STIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRTVLTVCLGKSTYARCGII 120

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEICETSYKDRGGKYQGQ 180
           VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDE CETSY+DRGGKYQGQ
Sbjct: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEPCETSYRDRGGKYQGQ 180

Query: 181 HGVTLPKT 188
           HGVTLPKT
Sbjct: 181 HGVTLPKT 188


>NMB0849 [F] COG0717 Deoxycytidine deaminase Nme Neisseria meningitidis MC58
          Length = 188

 Score =  343 bits (879), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 162/187 (86%), Positives = 174/187 (93%)

Query: 1   MAIKSDKWIRRMAESEGMIEPFEPGQVREANGQKIVSYGTSSYGYDIRCANEFKIFTNIN 60
           M+IKSDKWIRRM+E  GMI+PFEP Q++EA+G++I+SYGTSSYGYDIRCANEFKIFTNIN
Sbjct: 1   MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYGYDIRCANEFKIFTNIN 60

Query: 61  STIVDPKNFDEKSFVDFHGDVCIIPPNSFALARTVEYFRIPRSVLTICLGKSTYARCGII 120
           STIVDPKNFD K+FV    D CIIPPNSFALARTVEYFRIPR+VLT+CLGKSTYARCGII
Sbjct: 61  STIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPRNVLTVCLGKSTYARCGII 120

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEICETSYKDRGGKYQGQ 180
           VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEG AQVLFFESDEICETSYKDR GKY GQ
Sbjct: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFFESDEICETSYKDRNGKYMGQ 180

Query: 181 HGVTLPK 187
            GVTLPK
Sbjct: 181 TGVTLPK 187


>NMA1060 [F] COG0717 Deoxycytidine deaminase NmA Neisseria meningitidis
           Z2491
          Length = 188

 Score =  343 bits (879), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 162/187 (86%), Positives = 174/187 (93%)

Query: 1   MAIKSDKWIRRMAESEGMIEPFEPGQVREANGQKIVSYGTSSYGYDIRCANEFKIFTNIN 60
           M+IKSDKWIRRM+E  GMI+PFEP Q++EA+G++I+SYGTSSYGYDIRCANEFKIFTNIN
Sbjct: 1   MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYGYDIRCANEFKIFTNIN 60

Query: 61  STIVDPKNFDEKSFVDFHGDVCIIPPNSFALARTVEYFRIPRSVLTICLGKSTYARCGII 120
           STIVDPKNFD K+FV    D CIIPPNSFALARTVEYFRIPR+VLT+CLGKSTYARCGII
Sbjct: 61  STIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPRNVLTVCLGKSTYARCGII 120

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEICETSYKDRGGKYQGQ 180
           VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEG AQVLFFESDEICETSYKDR GKY GQ
Sbjct: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFFESDEICETSYKDRNGKYMGQ 180

Query: 181 HGVTLPK 187
            GVTLPK
Sbjct: 181 TGVTLPK 187


>PA3480 [F] COG0717 Deoxycytidine deaminase Pae Pseudomonas aeruginosa
          Length = 188

 Score =  325 bits (832), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 151/188 (80%), Positives = 164/188 (87%)

Query: 1   MAIKSDKWIRRMAESEGMIEPFEPGQVREANGQKIVSYGTSSYGYDIRCANEFKIFTNIN 60
           M IKSDKWIRRMA+  GMIEPF   QVR A+  +++SYG SSYGYD+RCA EFK+FTNI+
Sbjct: 1   MTIKSDKWIRRMAQEHGMIEPFVERQVRGADDSRVISYGVSSYGYDVRCAAEFKVFTNIH 60

Query: 61  STIVDPKNFDEKSFVDFHGDVCIIPPNSFALARTVEYFRIPRSVLTICLGKSTYARCGII 120
           S +VDPKNFDEKSFVD + DVCIIPPNSFALARTVEYFRIPR VLTICLGKSTYARCGII
Sbjct: 61  SAVVDPKNFDEKSFVDINSDVCIIPPNSFALARTVEYFRIPRDVLTICLGKSTYARCGII 120

Query: 121 VNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEICETSYKDRGGKYQGQ 180
           VNVTP EPEWEG+VTLEFSNTT LPAKIYA EG AQ+LF +SDE CE SYKDRGGKYQGQ
Sbjct: 121 VNVTPLEPEWEGHVTLEFSNTTNLPAKIYANEGVAQMLFLQSDEACEVSYKDRGGKYQGQ 180

Query: 181 HGVTLPKT 188
            GVTLPK 
Sbjct: 181 RGVTLPKA 188


>XF0762 [F] COG0717 Deoxycytidine deaminase Xfa Xylella fastidiosa 9a5c
          Length = 191

 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 147/191 (76%), Positives = 169/191 (88%), Gaps = 3/191 (1%)

Query: 1   MAIKSDKWIRRMAESEGMIEPFEPGQVRE-ANGQKIVSYGTSSYGYDIRCANEFKIFTNI 59
           M+IKSD+WIR MA+  GMI PFEPGQ+++ A GQ+IVSYGTSSYGYD+RC+ EFKIFTNI
Sbjct: 1   MSIKSDRWIRHMAQQHGMIAPFEPGQIKQNATGQRIVSYGTSSYGYDVRCSREFKIFTNI 60

Query: 60  NSTIVDPKNFDEKSFVDFHGDVCIIPPNSFALARTVEYFRIPRSVLTICLGKSTYARCGI 119
           NSTIVDPK FD  SF+D   DVCIIPPNSFALART+EYFRIPR+VL ICLGKSTYARCGI
Sbjct: 61  NSTIVDPKQFDNGSFIDVESDVCIIPPNSFALARTIEYFRIPRNVLVICLGKSTYARCGI 120

Query: 120 IVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFES--DEICETSYKDRGGKY 177
           IVNVTP EPEWEG+VTLEFSNTTPLPA+IYA EG AQ+LF ++  D++C+TSY+DR GKY
Sbjct: 121 IVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFLQADPDDVCQTSYRDRNGKY 180

Query: 178 QGQHGVTLPKT 188
           QGQ GVTLP+T
Sbjct: 181 QGQTGVTLPRT 191