BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0015.p (226 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 156 3e-38 RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport... 142 4e-34 RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport... 130 2e-30 SMc03120 [E] COG0411 ABC-type branched-chain amino acid transpor... 124 1e-28 SMb20785 [E] COG0411 ABC-type branched-chain amino acid transpor... 122 5e-28 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 122/192 (63%) Query: 2 FVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFN 61 F P+ G+++ G+EI GLTP + ++GLARSFQITN+F GL+++EN+RL++ R+ +F Sbjct: 56 FTPSSGSIRFQGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFT 115 Query: 62 MWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDE 121 W+ + S ++ AE + L+ + L LSY QR +++G+ L S P ++++DE Sbjct: 116 FWRPVSSMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDE 175 Query: 122 PLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQA 181 P+AG++ E + L++ I N ++IVEHD+ V + +++V+ G ++ +GTP + Sbjct: 176 PMAGMSQEETDYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEI 235 Query: 182 RADQRVQEIYTG 193 R + RV+E Y G Sbjct: 236 RENARVREAYLG 247 >RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 266 Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 121/207 (58%) Query: 2 FVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFN 61 F P+ G+V+LNG+EI GL P +I +RGL+RSFQITN+F LS++ENLR ++ +++ Sbjct: 57 FAPSAGSVRLNGEEIAGLAPYEINRRGLSRSFQITNIFHRLSVFENLRCAVLWSLGYQYS 116 Query: 62 MWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDE 121 W + + + ++ +GL + G L+Y QR +++GI + V+L+DE Sbjct: 117 FWHRLAELRDARERAEAVLEQIGLTHRHDAAAGTLTYAEQRALEIGITIAGGADVILLDE 176 Query: 122 PLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQA 181 P AG++ +E + L++ + +++VEHD+ V G + +++V+ G V+ + TP+ Sbjct: 177 PTAGMSRSESDHAVDLIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAI 236 Query: 182 RADQRVQEIYTGTGTPPVTGRNRCSAA 208 R ++RV+E Y GT N +A Sbjct: 237 RNNRRVKEAYLGTTLDANDAANEAESA 263 >RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 257 Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 12/198 (6%) Query: 2 FVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFN 61 F P G V+L+G +I L+ Q +RG+ R+FQI LF GL++ E++ L++ R + ++ Sbjct: 61 FAPTAGQVRLDGDDITRLSAHQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWH 120 Query: 62 MWKDIDSYPEIHAETDELMRFLG---LKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLL 118 + + ++ A DE M LG L AL YG QRL+++ +AL + P +LL Sbjct: 121 WHRTVAAHT---AARDEAMALLGRLQLGADASSPTHALPYGKQRLLEIALALATLPRILL 177 Query: 119 MDEPLAGLAAAERERVSRLVKIIAG---NIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMS 175 +DEP AG+ A E + L ++IAG +I +L +EHD++ V F+++++V+ G VL Sbjct: 178 LDEPAAGIPAGES---AELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTE 234 Query: 176 GTPDQARADQRVQEIYTG 193 GTP + AD RV+E+Y G Sbjct: 235 GTPQEIAADPRVREVYLG 252 >SMc03120 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 262 Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 112/193 (58%), Gaps = 4/193 (2%) Query: 4 PNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQ--ARHASRFN 61 P HGT+ L G++I P ++ + GL RSFQI+ +F L++ +N+R++LQ R A++F Sbjct: 67 PTHGTITLLGEDITRTAPDKVARMGLVRSFQISAVFPHLTVLDNVRVALQRPNRLATQF- 125 Query: 62 MWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDE 121 WK + S ++ + ++L+R +GL LSYG +R++++ L +P VLL+DE Sbjct: 126 -WKSLSSLDTLNGKAEQLIRSVGLDKEANAVAADLSYGRKRVLEIATTLALEPKVLLLDE 184 Query: 122 PLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQA 181 P+AG+ + V+ +++ +A VL+VEH++ V VTV+ +G +L G Sbjct: 185 PMAGMGHEDVGMVAEIIREVARERAVLMVEHNLSVVATLCHHVTVLQRGEILAEGDYATV 244 Query: 182 RADQRVQEIYTGT 194 D RV+ Y GT Sbjct: 245 SEDPRVRTAYMGT 257 >SMb20785 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 254 Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 113/191 (59%) Query: 4 PNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFNMW 63 P+ G V++ G+ + + +RGL RSFQ+T LF+ ++ E++ L++ R M+ Sbjct: 56 PDAGEVRIGGETVTNVDAIGRVRRGLVRSFQVTRLFQDMTPAEHVALAVLQRDGRAGRMF 115 Query: 64 KDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDEPL 123 + + P + AE L+ LGL+ + ++YG QRL+++ +AL KP VLL+DEP Sbjct: 116 GNFLAMPGVMAEAGSLLGKLGLRDLAHRPVREIAYGQQRLLEIAVALALKPRVLLLDEPA 175 Query: 124 AGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQARA 183 AG+ ++ R+ + + + ++ VL++EHD+D V F+++V V+ G+V+ G+P Sbjct: 176 AGVPQSDTGRIEQALADLPDDLAVLMIEHDMDLVFRFAKRVIVLAAGTVIFDGSPADVTK 235 Query: 184 DQRVQEIYTGT 194 D RV+E Y G+ Sbjct: 236 DPRVREAYLGS 246