BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0003.p         (196 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp...   142   4e-34
PAE1066 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   137   1e-32
mlr7950 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   133   2e-31
MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp...   132   7e-31
CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   130   2e-30

>MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Mac Methanosarcina acetivorans
           str.C2A
          Length = 268

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 94/144 (65%), Gaps = 6/144 (4%)

Query: 25  KLSFKNIQKSFS------GLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPS 78
           ++S KN+ + FS      G   + + S D++ GE + L+GPSGCGK+TLL IAAGLET +
Sbjct: 17  RVSVKNVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLETLT 76

Query: 79  SGSILADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLA 138
           SG I  +G P+TGP P+R ++FQ+ +L+PW T+  N+   LE Q + K  A  Q   +L 
Sbjct: 77  SGEITLNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEMQGIKKSEARKQVEKYLE 136

Query: 139 KVNLSGFEAYYPHQVSGGMRQRAA 162
            V L  F+  YPH++SGGM+QRAA
Sbjct: 137 LVGLGQFKNSYPHELSGGMQQRAA 160


>PAE1066 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Pya Pyrobaculum aerophilum
          Length = 254

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/137 (51%), Positives = 86/137 (62%)

Query: 26  LSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSILAD 85
           +    I+K +  + V +D S DIE GE VAL+GPSGCGKSTLL I AGLE P SG +   
Sbjct: 14  IEVNKIKKRYGKVEVFNDLSIDIETGEFVALLGPSGCGKSTLLRIIAGLERPDSGEVRFR 73

Query: 86  GQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKVNLSGF 145
           G+PV GP  E  LMFQ   + PW T + NVAL L  + +  + A   A  +LA V LSGF
Sbjct: 74  GEPVRGPRREIALMFQSPTILPWKTAQDNVALPLVARGMGWREAREAAARYLALVGLSGF 133

Query: 146 EAYYPHQVSGGMRQRAA 162
           E  YP Q+SGGM+QR A
Sbjct: 134 EEAYPKQLSGGMQQRVA 150


>mlr7950 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Mlo Mesorhizobium loti
          Length = 300

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 90/142 (63%)

Query: 21  IEFMKLSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSG 80
           IE + +S + +  +   L  + DF+  +++GE VA+VGP+GCGKST L++  GL +PS+G
Sbjct: 41  IELINVSRRFLSPTGKSLTALRDFTMTVQRGEFVAVVGPTGCGKSTTLNLVTGLASPSAG 100

Query: 81  SILADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKV 140
            +   G PV G  P    +FQ +AL+PW T+  NV     F+   K  A A AR WLA+V
Sbjct: 101 EVRVMGAPVKGIDPRIGFVFQTDALFPWRTVIDNVMAGPLFRGKAKSEAMASARDWLARV 160

Query: 141 NLSGFEAYYPHQVSGGMRQRAA 162
            LS FE +YPHQ+SGGMR+R A
Sbjct: 161 GLSRFEQHYPHQLSGGMRKRVA 182


>MK0603 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Mka Methanopyrus kandleri AV19
          Length = 246

 Score =  132 bits (331), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/138 (47%), Positives = 88/138 (63%), Gaps = 1/138 (0%)

Query: 26  LSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSILAD 85
           L  +++ KS+  L V+D  + ++ +GE  A+VGPSGCGK+TLL I AGLE   +G +L D
Sbjct: 5   LKVEDLHKSYDDLKVLDGITFEVSEGEFFAIVGPSGCGKTTLLKIIAGLEDYDAGRVLVD 64

Query: 86  GQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKV-NLSG 144
           G+ V  P P+R L+FQE A++PW T+ +NV  A   Q  D + A   AR  L  V  L G
Sbjct: 65  GEEVREPGPDRALVFQEYAIFPWKTVLENVMFAPLMQGKDPEEAERIARECLKVVPGLEG 124

Query: 145 FEAYYPHQVSGGMRQRAA 162
           FE  YP Q+SGGM+QR A
Sbjct: 125 FEDAYPKQLSGGMKQRVA 142


>CAC0107 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Cac Clostridium acetobutylicum
          Length = 279

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 89/143 (62%), Gaps = 4/143 (2%)

Query: 24  MKLSFKNIQKSF----SGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSS 79
           M +  K + K F      +H +D+ +  I++GE + L+GPSGCGKSTLL+I AGLE P+ 
Sbjct: 1   MGIEIKGVSKDFISKEKKVHTLDEVNLSIKKGEFICLLGPSGCGKSTLLNIIAGLEKPTK 60

Query: 80  GSILADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAK 139
           G +  +   +  P P+R  MFQE+AL+PWL +  NV   ++ + V K+    +A  +L  
Sbjct: 61  GIVYLNNMEIKAPGPDRAFMFQESALFPWLKVIDNVEFGMKIKDVPKEERREKALKYLKM 120

Query: 140 VNLSGFEAYYPHQVSGGMRQRAA 162
           V+L+ F+  Y H++SGGMRQR A
Sbjct: 121 VHLTKFQNSYVHELSGGMRQRVA 143