BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0065.p         (112 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cj0484 [GEPR] COG0477 Permeases of the major facilitator superfa...    94   6e-20
PA2214 [GEPR] COG0477 Permeases of the major facilitator superfa...    86   2e-17
RSc2352 [GEPR] COG0477 Permeases of the major facilitator superf...    82   2e-16
BMEII1096 [GEPR] COG0477 Permeases of the major facilitator supe...    81   5e-16
RSp0182 [GEPR] COG0477 Permeases of the major facilitator superf...    79   3e-15

>Cj0484 [GEPR] COG0477 Permeases of the major facilitator superfamily Cje
          Campylobacter jejuni
          Length = 410

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 53/75 (70%)

Query: 18 SGPLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFGAGLFFI 77
          S  L     K+ WRILPL V+MF  + +DR NI FV+SH+  D GIG AA+  GAG+FFI
Sbjct: 6  SIKLELVCKKISWRILPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGAGIFFI 65

Query: 78 GYAIFEVPSNMLLQK 92
          GYAIFEVPSN+ L K
Sbjct: 66 GYAIFEVPSNLFLHK 80


>PA2214 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae
          Pseudomonas aeruginosa
          Length = 440

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 53/72 (73%)

Query: 21 LASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFGAGLFFIGYA 80
          L+SAI   + R+LP  V+M++  +IDR N+G+ R+ L  D G+G AAF FGA +FFIGYA
Sbjct: 11 LSSAIATSRLRLLPFLVLMYVLAFIDRANVGYARAFLQADTGLGDAAFAFGASIFFIGYA 70

Query: 81 IFEVPSNMLLQK 92
           FEVPSN++L +
Sbjct: 71 CFEVPSNLMLHR 82


>RSc2352 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
          Ralstonia solanacearum
          Length = 442

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 52/82 (63%)

Query: 11 AHPDGKASGPLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGF 70
          A P   ASG   +   KV WR++P  ++ ++  Y+DRVN+GF +  +  DL      +G 
Sbjct: 14 ALPPQSASGFEEATYRKVSWRLIPFLLLCYVVAYLDRVNVGFAKLQMLNDLKFSETVYGL 73

Query: 71 GAGLFFIGYAIFEVPSNMLLQK 92
          GAG+FFIGY +FEVPSN++L +
Sbjct: 74 GAGIFFIGYFLFEVPSNVILHR 95


>BMEII1096 [GEPR] COG0477 Permeases of the major facilitator superfamily Bme
           Brucella melitensis
          Length = 451

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 49/66 (74%)

Query: 27  KVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFGAGLFFIGYAIFEVPS 86
           KV +RI+PL +I +I  Y+DRVN+GF +  ++ +LG   A +G GAGLFFIGY  FE+PS
Sbjct: 39  KVAFRIIPLLMICYIIAYLDRVNVGFAKLQMSEELGFSEAIYGLGAGLFFIGYFFFEIPS 98

Query: 87  NMLLQK 92
           N+LL K
Sbjct: 99  NILLHK 104


>RSp0182 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
          Ralstonia solanacearum
          Length = 453

 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 6/86 (6%)

Query: 7  AAYAAHPDGKASGPLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTA 66
          A + A PD +A       + K+ WRILP    ++I +Y+DR NIG+    +  +L + + 
Sbjct: 18 ARHPAAPDERA------IVRKITWRILPFVFALYIISYLDRANIGYAALQMNQELALSSE 71

Query: 67 AFGFGAGLFFIGYAIFEVPSNMLLQK 92
          AFGF +G+FFIGY +FEVPSN++L +
Sbjct: 72 AFGFVSGIFFIGYFLFEVPSNLMLNR 97