BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0044.p (341 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH3645 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 338 7e-93 BH0027 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 332 5e-91 CAC3628 [E] COG4608 ABC-type oligopeptide transport system, ATPa... 328 1e-89 BS_appF [E] COG4608 ABC-type oligopeptide transport system, ATPa... 328 2e-89 BS_ykfD [E] COG4608 ABC-type oligopeptide transport system, ATPa... 321 1e-87 >BH3645 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Bha Bacillus halodurans Length = 322 Score = 338 bits (868), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 154/283 (54%), Positives = 219/283 (77%), Gaps = 4/283 (1%) Query: 5 PLLQVSGLKKHFAAG----KRGAAPVKAVDDVSFAIEEGKTLGLVGESGCGKSTTGRSVL 60 PLL+V L K F R V+AVD++SF++ EG+ LG+VGESGCGKSTTG+++L Sbjct: 4 PLLEVKNLTKSFDINGGFFSRKVGEVRAVDNLSFSVYEGEVLGIVGESGCGKSTTGKAIL 63 Query: 61 RLIEPTAGSVNFMGEEISKLSSSALRAMRRNMQMVFQDPFASLNPRMTIGEVLEEPLIVH 120 RLIEP++G V F G EI+ LS +R RR+MQ++FQDP+ASLNPR TI +++ EPLIVH Sbjct: 64 RLIEPSSGEVYFAGTEITALSEGDMRKRRRDMQIIFQDPYASLNPRHTIEKIIREPLIVH 123 Query: 121 GLFDRATRKRKVAEILDVVGLSQAYASRHPHEFSGGQRQRVGIARAIITRPKLVVADEAV 180 + + + +V E+L+ VGLS +A+R+PH+FSGGQRQR+GIARA+ PKLV+ DE V Sbjct: 124 QIGTKKEQLERVEELLETVGLSSDHATRYPHQFSGGQRQRIGIARALAVHPKLVICDEPV 183 Query: 181 SALDVSIQAQILNLLQELQKEFALTYLFVSHDLAVIRHVSDSIGVMYLGRMVEYGSCESV 240 SALDVS+Q+QILNL+ +L++ FALTY+F++HDL+V++H+SD + VMYLGRMVE + + + Sbjct: 184 SALDVSVQSQILNLMADLKETFALTYIFIAHDLSVVKHISDRVAVMYLGRMVEMATKDQL 243 Query: 241 YGAPRHPYTQALLSAIPREHPDQVRQRIVLQGGIPNPASPPPG 283 + P+HPYT+ALLSA+P PD +++I+L+G +P+P++PP G Sbjct: 244 FENPKHPYTRALLSAVPVPDPDAAKEKILLKGDVPSPSNPPEG 286 >BH0027 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Bha Bacillus halodurans Length = 338 Score = 332 bits (852), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 158/282 (56%), Positives = 210/282 (74%), Gaps = 4/282 (1%) Query: 6 LLQVSGLKKHFAAGK----RGAAPVKAVDDVSFAIEEGKTLGLVGESGCGKSTTGRSVLR 61 LL+V GLK++F R VKAVDDVSF I EG+T+ +VGESGCGKSTTGR++LR Sbjct: 5 LLKVEGLKQYFPIKGGILGRTVNHVKAVDDVSFTIYEGETVSIVGESGCGKSTTGRAILR 64 Query: 62 LIEPTAGSVNFMGEEISKLSSSALRAMRRNMQMVFQDPFASLNPRMTIGEVLEEPLIVHG 121 L EPT G + F GE++ L+ +R R+++Q++FQDP+AS+NPR TI +VLEE + + Sbjct: 65 LDEPTDGKIEFQGEDLLSLNKREMRKKRKDLQIIFQDPYASINPRQTIRQVLEEAMEIQK 124 Query: 122 LFDRATRKRKVAEILDVVGLSQAYASRHPHEFSGGQRQRVGIARAIITRPKLVVADEAVS 181 + R R ++ E++D VGL A R PHEFSGGQRQR+GIARA+ PKL+V DEAVS Sbjct: 125 VVPRDKRGERIRELMDTVGLGSHQADRFPHEFSGGQRQRIGIARALSVNPKLIVCDEAVS 184 Query: 182 ALDVSIQAQILNLLQELQKEFALTYLFVSHDLAVIRHVSDSIGVMYLGRMVEYGSCESVY 241 ALDVSIQAQ++NLL+ LQ+EF LTYLF+SHDL V+RH+SD + VMYLGR+VE S++ Sbjct: 185 ALDVSIQAQVINLLKRLQREFKLTYLFISHDLGVVRHISDRVIVMYLGRIVEIADKTSLF 244 Query: 242 GAPRHPYTQALLSAIPREHPDQVRQRIVLQGGIPNPASPPPG 283 P+HPYT+ALLSAIP P++ ++RI+L+G +P+P PP G Sbjct: 245 ENPQHPYTKALLSAIPVPDPEKKKERIILKGDVPSPIDPPNG 286 >CAC3628 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Cac Clostridium acetobutylicum Length = 322 Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 156/283 (55%), Positives = 210/283 (74%), Gaps = 4/283 (1%) Query: 3 SAPLLQVSGLKKHFAAGKRGAAPVKAVDDVSFAIEEGKTLGLVGESGCGKSTTGRSVLRL 62 S L++V LKK+F G A +KAVDDVSF I++G+TLGLVGESGCGK+T GR+VL L Sbjct: 7 SDVLIEVKNLKKYFNVGHN--AILKAVDDVSFTIKKGETLGLVGESGCGKTTCGRTVLGL 64 Query: 63 IEPTAGSVNFMGEEISKLSSSALRAMRRNMQMVFQDPFASLNPRMTIGEVLEEPLIVHGL 122 + T G VN+ G I L A + + QM+FQDP+A LNPRMT+G+++ E + VHGL Sbjct: 65 YQATEGEVNYDGVNIHSLRGKAKKEFSKKAQMIFQDPYACLNPRMTVGDIIAEGIDVHGL 124 Query: 123 FDRATRKRKVAEILDVVGLSQAYASRHPHEFSGGQRQRVGIARAIITRPKLVVADEAVSA 182 + R +K+ E+LD VGL++ +ASR PHEFSGGQRQR+GIARA+ P+ +V DE +SA Sbjct: 125 YKGEERTKKIYEMLDHVGLNREHASRFPHEFSGGQRQRIGIARALAINPEFIVCDEPISA 184 Query: 183 LDVSIQAQILNLLQELQKEFALTYLFVSHDLAVIRHVSDSIGVMYLGRMVEYGSCESVYG 242 LDVSIQAQI+NLL +LQ+E LTYLF++HDL++++H+SD +GVMYLG MVE+ + +Y Sbjct: 185 LDVSIQAQIVNLLIKLQREMGLTYLFIAHDLSMVKHISDRVGVMYLGTMVEFAASHDLYE 244 Query: 243 APRHPYTQALLSAIPREHP--DQVRQRIVLQGGIPNPASPPPG 283 P HPYT+AL+SAIP P ++ RQRI L+G +P+P +P PG Sbjct: 245 NPLHPYTKALMSAIPIPDPKVEKTRQRIKLEGEVPSPINPKPG 287 >BS_appF [E] COG4608 ABC-type oligopeptide transport system, ATPase component Bsu Bacillus subtilis Length = 329 Score = 328 bits (840), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 157/285 (55%), Positives = 216/285 (75%), Gaps = 7/285 (2%) Query: 6 LLQVSGLKKHF----AAGKRGAAPVKAVDDVSFAIEEGKTLGLVGESGCGKSTTGRSVLR 61 +L++ +KK+F +R VKAVD VSF++++G+TLG+VGESGCGKST GR+++R Sbjct: 9 ILELRDVKKYFPIRSGLFQRKVGDVKAVDGVSFSLKKGETLGIVGESGCGKSTAGRTMIR 68 Query: 62 LIEPTAGSVNFMGEEISKLSSSALR-AMRRNMQMVFQDPFASLNPRMTIGEVLEEPLIVH 120 L +PT G + F G++IS LS LR ++R+N+QMVFQDPFASLNPR T+ +++EP H Sbjct: 69 LYKPTEGQILFKGQDISNLSEEKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFNTH 128 Query: 121 GLFDRATRKRKVAEILDVVGLSQAYASRHPHEFSGGQRQRVGIARAIITRPKLVVADEAV 180 ++ R KV E+L VGL ++A R+PHEFSGGQRQR+GIARA+ P+L++ADE V Sbjct: 129 NMYTMRERNEKVEELLARVGLHPSFAGRYPHEFSGGQRQRIGIARALTLNPELIIADEPV 188 Query: 181 SALDVSIQAQILNLLQELQKEFALTYLFVSHDLAVIRHVSDSIGVMYLGRMVEYGSCESV 240 SALDVSIQ Q++NL++ELQ+EF LTYLF+SHDL+V+RH+SD +GVMYLG+M+E + Sbjct: 189 SALDVSIQPQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKMMELTGKHEL 248 Query: 241 YGAPRHPYTQALLSAIP--REHPDQVRQRIVLQGGIPNPASPPPG 283 Y P HPYTQALLS++P R+ R+RIVL+G +P+PA+PP G Sbjct: 249 YDNPLHPYTQALLSSVPVTRKRGSVKRERIVLKGELPSPANPPKG 293 >BS_ykfD [E] COG4608 ABC-type oligopeptide transport system, ATPase component Bsu Bacillus subtilis Length = 327 Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 157/286 (54%), Positives = 209/286 (73%), Gaps = 5/286 (1%) Query: 1 MSSAPLLQVSGLKKHFAAGKRGAAPVKAVDDVSFAIEEGKTLGLVGESGCGKSTTGRSVL 60 M PLL+VS LK HF AGK+ VKAVD V+F I EG+T GLVGESGCGKST GR ++ Sbjct: 1 MRRLPLLEVSQLKMHFDAGKKRT--VKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLM 58 Query: 61 RLIEPTAGSVNFMGEEISKLSSSALRAMRRNMQMVFQDPFASLNPRMTIGEVLEEPLIVH 120 RL +PT GSV + G + LS A R +QM+FQDP+ASLNPRMT+ E++ EP+ +H Sbjct: 59 RLYQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYASLNPRMTVREIILEPMEIH 118 Query: 121 GLFD-RATRKRKVAEILDVVGLSQAYASRHPHEFSGGQRQRVGIARAIITRPKLVVADEA 179 L++ R V E+L+ VGL + SR+PHEFSGGQRQR+GIARA+ P+ +VADE Sbjct: 119 NLYNTHKARLSVVDELLEAVGLHPDFGSRYPHEFSGGQRQRIGIARALSLNPEFIVADEP 178 Query: 180 VSALDVSIQAQILNLLQELQKEFALTYLFVSHDLAVIRHVSDSIGVMYLGRMVEYGSCES 239 +SALDVS+QAQ++NLL+ LQKE LT+LF++HDL++++H+SD IGVMYLG M+E + Sbjct: 179 ISALDVSVQAQVVNLLKRLQKEKGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGT 238 Query: 240 VYGAPRHPYTQALLSAIPREHP--DQVRQRIVLQGGIPNPASPPPG 283 +Y P HPYT+ALLS+IP P + R+RI+L+G +P+P +PP G Sbjct: 239 LYREPLHPYTKALLSSIPIPDPELEDKRERILLKGELPSPVNPPSG 284