BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0023.p         (104 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA3367 Non COG                                                         85   4e-17

>PA3367 Non COG
          Length = 112

 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 10/105 (9%)

Query: 6   FLLALMLVAAHHSGVAANTPCSGKKGGVSHCAGAEFICNDGSVSASKKVCSM------SN 59
           FLL++  + A    +AAN+PCSGKKGG++ C G  F+CNDGS+SASK+ C+         
Sbjct: 12  FLLSVCALPA----LAANSPCSGKKGGIAGCDGDIFLCNDGSISASKRSCAAYFGNAGGR 67

Query: 60  RQQLLPLAKDDDDGGCSCRSHRYCTGPRGGQFCYTDSGNKSYRRR 104
             Q           GC+C S  +CTGPRGG +C T  G KSYRR+
Sbjct: 68  TGQPAVQRLQGTTQGCACGSGSFCTGPRGGVYCLTPGGKKSYRRK 112