BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0021.p         (585 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMA0428 Non COG                                                        81   7e-15
YPO0392 Non COG                                                        64   8e-10

>NMA0428 Non COG
          Length = 548

 Score = 80.9 bits (198), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 119/263 (45%), Gaps = 35/263 (13%)

Query: 22  YPSSERALKELIDNAWDADAETVSITL-PKPMSDDPIVISDDGCGMTEEELRRHYLSIAT 80
           Y  +  A+ ELI NA+DA A  V + L  KP  +  IVI D+G GM+ +E+   YL I  
Sbjct: 23  YSHTVPAIAELIANAYDACATEVEVRLFDKP--EHKIVIKDNGIGMSFDEINDFYLRIGR 80

Query: 81  DRRSRRGDRTAGKSRSIKGRKGIGKFAGLMAASVMILETRARGRLCGFTLRLADLATVDD 140
           +RR  +     G  R   G+KG+GK A     + + + T        FTL  A++     
Sbjct: 81  NRREEKQASPCG--RIPTGKKGLGKLALFGLGNKIEISTIQGNERVTFTLDYAEIRRSKG 138

Query: 141 IEQLNIAFYSESCSEN-QHGTTITLTNLHQGLAFPDSNKLRQVL-LQDYGRQDDFRIAV- 197
           I Q    F  ES   N + GTTITLT L +   +P  N +  +  L D+  Q DF+I V 
Sbjct: 139 IYQ--PEFRKESVESNIESGTTITLTELTKKQGYPLDNYVEHLSRLFDFPAQ-DFKIKVS 195

Query: 198 ----DGKRLDVN-------------------DISGSYSEFDQDLPAVGNVKLRFAISDAK 234
               + K +D N                   +IS   S+F+Q     G ++ +F  ++  
Sbjct: 196 LNGSEPKIIDGNLKYDLVTPQFEWEYQDLATNISSLSSKFEQ-YEYSGLIQGKFITTEKP 254

Query: 235 GGLRQPGITLRVDGKSVGKPSFF 257
                 GITL  +G+ V  P FF
Sbjct: 255 LKNNMKGITLFANGRMVNMPEFF 277


>YPO0392 Non COG
          Length = 240

 Score = 64.3 bits (155), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 12/174 (6%)

Query: 1   MKAPDLRFQVDSRLATLLSQEYPSSERALKELIDNAWDADAETVSIT-LPKPMSDDPIVI 59
           M +  L+F    ++   LSQ+ PSS  AL EL+ N++DA +  V+IT +P  +    I+I
Sbjct: 1   MVSTSLKF--GGKIIEELSQKIPSSLFALNELVKNSYDAFSPDVTITVIPSEL---KIII 55

Query: 60  SDDGCGMTEEELRRHYLSIATDRRSRRGDRTA--GKSRSIKGRKGIGKFAGLMAASVMIL 117
           SD G GM+ +E+  H L   +    + G   +  G  R ++G KG+G  +       +  
Sbjct: 56  SDYGNGMSVDEI--HSLFHISKSTKKYGCEVSQNGIKRIVQGSKGLGFLSAFKFGDKVEW 113

Query: 118 ETRARGRLCGFTLRLADLATVDDIEQLNIAFYSESCSENQHGTTITLTNLHQGL 171
           +T   G    F+++ +DL   DD+  + I   ++  S N++GT I +    Q +
Sbjct: 114 KTCQNGICSVFSVKKSDLIYKDDVSGIKIPITTD--SSNKNGTEIRIFTNQQDM 165