BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0026.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0213 [F] COG0518 GMP synthase - Glutamine amidotransferase do... 204 2e-52 XF0560 [F] COG0518 GMP synthase - Glutamine amidotransferase dom... 190 3e-48 mll8746 [F] COG0518 GMP synthase - Glutamine amidotransferase do... 117 2e-26 CC0409 [F] COG0518 GMP synthase - Glutamine amidotransferase dom... 97 3e-20 Cgl1505 [F] COG0518 GMP synthase - Glutamine amidotransferase do... 77 5e-14 >RSc0213 [F] COG0518 GMP synthase - Glutamine amidotransferase domain Rso Ralstonia solanacearum Length = 238 Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 107/237 (45%), Positives = 142/237 (59%) Query: 13 SIAPVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQYRAVL 72 ++ P+L+I G P D +R G A EIV VF+G L EP+ +RA + Sbjct: 2 TVRPLLLIQAGTPPDAIRAQVGDLPRWFGAAMDRDSQAFEIVRVFEGAPLPEPDVHRAAI 61 Query: 73 ITGSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPAGRVAG 132 ITGS +MVTDL WSE TA W+RRA P+FGVCYGHQL++HA GGKVGY+P GR G Sbjct: 62 ITGSWSMVTDLHAWSEATADWIRRAVAINTPLFGVCYGHQLMAHALGGKVGYHPRGREMG 121 Query: 133 TMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLRLAPNI 192 M + R +A E LL P F+AH+ H Q V++ P GA VLA S DPH ++R +P Sbjct: 122 CMDIERLPLAQTEPLLAGAPQRFKAHLTHLQTVVQLPAGAEVLARSAHDPHQVVRYSPTA 181 Query: 193 FSAQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFLDLHA 249 S QFHPEFT A ++ V + G+D AM +Q+ +TP +LRRF++ +A Sbjct: 182 ISTQFHPEFTPAISSACISTRRHVLREEGLDPTAMLSQLDDTPTPLLMLRRFVEAYA 238 >XF0560 [F] COG0518 GMP synthase - Glutamine amidotransferase domain Xfa Xylella fastidiosa 9a5c Length = 240 Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 100/233 (42%), Positives = 136/233 (58%), Gaps = 1/233 (0%) Query: 13 SIAPVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQYRAVL 72 S+ P L+I TG P+ +R+ YG + ++ A+GLA+ +T +V+V G+ L E + L Sbjct: 2 SVLPFLMIETGQPLPSVRR-YGCFPHWIRVASGLAESQTVVVNVEAGERLPTREGFAGAL 60 Query: 73 ITGSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPAGRVAG 132 I+GS VTD DWSERTA WL AA G+P+ G+CYGHQLL+HA GG+V NPAGR +G Sbjct: 61 ISGSAAFVTDRADWSERTAEWLCEAAYAGMPLLGICYGHQLLAHALGGEVACNPAGRESG 120 Query: 133 TMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLRLAPNI 192 T+ + HA A D+ L +P F AH H Q VL P GA VLA S D H R N Sbjct: 121 TIQLELHAAAFDDPLFANLPRHFSAHATHVQTVLRAPEGAVVLARSAQDQCHAFRWGQNS 180 Query: 193 FSAQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFL 245 + QFHPEF +R ++A + + G + QV P + +LRRF+ Sbjct: 181 WGVQFHPEFATHHMRGYVAARAQCLQRQGQCPRRIARQVSAAPVARQVLRRFV 233 >mll8746 [F] COG0518 GMP synthase - Glutamine amidotransferase domain Mlo Mesorhizobium loti Length = 280 Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 2/230 (0%) Query: 17 VLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSV--FQGQFLREPEQYRAVLIT 74 ++II TGD D++ + +G + + E IV V G L + ++IT Sbjct: 1 MVIIKTGDTYDQIGERHGDFEDWISNILLSRGCELSIVVVDPRSGGKLPKFSFVSGIVIT 60 Query: 75 GSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPAGRVAGTM 134 GS V + V W + + WL++A H +P+ G+C+GHQLL+ GG V +G G++ Sbjct: 61 GSHATVREDVPWIRQLSRWLQQALIHQVPILGICFGHQLLAQCLGGVVTARTSGAEIGSI 120 Query: 135 AVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLRLAPNIFS 194 + + L IP +F A ++H + + PP A VLA S +PH R+ P + Sbjct: 121 PITVTKEGGKDPLFDSIPPTFAAQLIHWESAVRLPPEAVVLAHSLSEPHQAFRVGPCAWG 180 Query: 195 AQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRF 244 QFHPE + V +L G D + A V TP S +LR F Sbjct: 181 VQFHPEISKTIVTEYLDLLDPRLSAEGHDVNQLKALVTATPYSTEVLRNF 230 >CC0409 [F] COG0518 GMP synthase - Glutamine amidotransferase domain Ccr Caulobacter vibrioides Length = 238 Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 114/244 (46%), Gaps = 21/244 (8%) Query: 11 AQSIAPVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQYRA 70 A + + ++ TG+P L+ +YG Y + G V +G+ P + A Sbjct: 2 ATRVLKIGLLETGEPPGPLKATYGGYGSMFETLLGDGH-AYRAYDVQRGELPAHPAENDA 60 Query: 71 VLITGSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPAGRV 130 +ITGS V D + W E A+LR +A P+ GVC+GHQ+++ AFGGKV +P G Sbjct: 61 YVITGSSAGVYDPLPWIEPLKAFLR-SARGETPLVGVCFGHQIMAEAFGGKVEKSPKGWG 119 Query: 131 AG--TMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLRL 188 G AV AV D+ +P S H V++ PP A VLA S P+ +L Sbjct: 120 VGLQAYAVAERAVWMDDAAEVAVPGS------HQDQVVDLPPTARVLAGSAFTPYGILAY 173 Query: 189 --APNIFSAQFHPEFTGEFVRAHL-----AYYTEVYGKCGIDTAAMCAQVCETPQSAALL 241 AP I S QFHPEF ++ +A + YT+ I A + + A + Sbjct: 174 DDAPAI-SMQFHPEFAPDYAKALIEARRGTRYTDPQADAAI---ASLDSPNDRARMADWI 229 Query: 242 RRFL 245 RRFL Sbjct: 230 RRFL 233 >Cgl1505 [F] COG0518 GMP synthase - Glutamine amidotransferase domain Cgl Corynebacterium glutamicum Length = 252 Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 4/155 (2%) Query: 66 EQYRAVLITGSPTMVTDL--VDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVG 123 E + V++ GSP T+ DW L H LP VCYG+ L+ GG++G Sbjct: 50 EGFDGVIVGGSPLNATNFEYSDWQRHVHRELSLLINHPLPTIFVCYGNTFLTFFSGGQIG 109 Query: 124 YNPAGRVAGTMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPH 183 T + A D L Q++PDSF + H++ + P PG VLA+ P Sbjct: 110 RTHPEDSGATTVLLTDAGKRDV-LTQDLPDSFTSFTGHTENSVAPAPGHVVLATGPTCPI 168 Query: 184 HMLRLAPNIFSAQFHPEFTGEFVRAHLAYYTEVYG 218 MLR N +S QFH + ++ + +Y+ YG Sbjct: 169 QMLRANKNTWSVQFHADMDAVGMKNRMDFYSN-YG 202