BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0085.p (761 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 271 4e-72 CC0896 Non COG 239 2e-62 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 238 3e-62 SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti 236 1e-61 alr3170_3 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 225 3e-58 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 271 bits (693), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 159/415 (38%), Positives = 236/415 (56%), Gaps = 9/415 (2%) Query: 328 DELTGLPNRHWVIRYLNRLLHDAAGDGRGFAVLFVDLDDFKNINDTLGHSSGDLLLQAVT 387 D LTGL NR L+ L AA + R +L++DLD FK +NDT GH +GD LL+ V Sbjct: 345 DTLTGLANRTNFREQLDARL--AAPEAR-LGLLYIDLDGFKLVNDTKGHRAGDALLERVA 401 Query: 388 QRLCELVPAP-HEVVRFSGDSFTVIHQGGSIDDAAQLADRILLAFSRPLMLSNQNILQIN 446 QRL + P + R GD F V+ D AA LA ++ A P L ++I Sbjct: 402 QRLRAVCDRPGMAIARLGGDEFAVLVPHDDADRAATLATALIEALGAPYALGADQNVRIG 461 Query: 447 LSIGISIFPRDGNSVDTLLKHADTAMHAAKSEGKKRFRFYQPQLSERLQIKIENENALRL 506 SIGI++ P G + LL AD A++AAK+ GK R + + R+Q + E LR Sbjct: 462 ASIGIALAPAHGRDTENLLARADIALYAAKAAGKGLARLFCADMETRIQARALLEAQLRA 521 Query: 507 AIE-RDEFVLYFQPRVNTMTGEFCSMEALARWQHPVRGIVSPLEFIPVAEETGLILKLGE 565 A+E +D +++QP V+ TG+ + EAL RW H RG V P EF+P+AE++GLI +LG Sbjct: 522 ALEHQDRLFVFYQPIVDVATGKVTAREALVRWHHAERGWVPPDEFVPIAEQSGLIDQLGR 581 Query: 566 LIIRKACAQLAQWRIAGLPLLPMSVNVSSRQLNQGNLNDIIATALAEHAVDPAQLEIELT 625 ++ +AC + +W ++VNVS QL + L + AL + + P +LEIE+T Sbjct: 582 FVLHRACREATRWEDGA----RVAVNVSPMQLGKATLAQTVHAALIDSGLAPDRLEIEVT 637 Query: 626 ESCMMADAIEVAEELASFRQLGIKLLVDDFGTGYSSLSQLQRLDLDVLKVDKAFTAELGV 685 E+ ++ + E E+L +G+++ +DDFGTGYSSL+ L+ D +K+D++F +L Sbjct: 638 ETALIQNEAESFEDLRQLYDMGVRVALDDFGTGYSSLAHLRAFPFDKIKIDRSFVRDLLE 697 Query: 686 RAESEVLFNAMVSMAHALRMTVVAEGVETEAQLHLLQALGCDEVQGYYISHPIPA 740 R +S VL A+ + L +T VAEGVET+A + ++ GC E QGYY P P+ Sbjct: 698 RPDSAVLVRAIADLGRQLGVTTVAEGVETQAHVRGIREAGCTEAQGYYYGRPAPS 752 >CC0896 Non COG Length = 677 Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 147/421 (34%), Positives = 229/421 (54%), Gaps = 8/421 (1%) Query: 326 NTDELTGLPNRHWVIRYLNRLLHDAAGDGRGFAVLFVDLDDFKNINDTLGHSSGDLLLQA 385 N D LT LPNR L+ + A GRGF +DLDDFK IND GH++GD LL Sbjct: 230 NLDSLTDLPNRRRYFAELDARVEAARQSGRGFVAGVIDLDDFKPINDAFGHATGDRLLIE 289 Query: 386 VTQRLCELVPAPHEVVRFSGDSFTVIHQGGSIDDAAQLADRILLAFSRPLMLSNQNILQI 445 V +RL AP R GD F +I DA ++ R L A + Q+ Sbjct: 290 VGRRLKAFDGAPILAARLGGDEFGLIIDAALEPDALRVLGRELCASLQATYDLRGVRAQV 349 Query: 446 NLSIGISIFPRDGNSVDTLLKHADTAMHAAKSEGKKRFRFYQPQLSERLQIKIENENALR 505 SIG FP ++ + L + AD A++ AK GK + + ++ E ALR Sbjct: 350 GASIGFCPFPSGADTSEQLFERADYALYHAKQNGKGAAVVFDERHEAAIRDMAVVEQALR 409 Query: 506 LAIERDEFVLYFQPRVNTMTGEFCSMEALARWQHPVRGIVSPLEFIPVAEETGLILKLGE 565 A E ++FQP V+ ++ ++EALARW P G + P FI AE +G I+++ Sbjct: 410 SADLEQEMSVHFQPLVDIVSQRTIALEALARWTSPEIGPIRPDVFIGAAERSGQIVEITR 469 Query: 566 LIIRKACAQLAQWRIAGLPL-LPMSVNVSSRQL-NQGNLNDIIATALAEHAVDPAQLEIE 623 L++ KA ++ W P+ + +S+N+S+R + + N+ ++A ++E + P +++ E Sbjct: 470 LLVAKALREMRAW-----PMDVRVSINLSARDIASMENVRRLLAI-VSESCIAPHRIDFE 523 Query: 624 LTESCMMADAIEVAEELASFRQLGIKLLVDDFGTGYSSLSQLQRLDLDVLKVDKAFTAEL 683 +TE+ ++ D + + LA+F +LG++ +DDFGTG+SSLS L+ L LD LK+D +F +++ Sbjct: 524 ITETAIVCDFDQARDALAAFHELGVRTALDDFGTGHSSLSHLRLLPLDKLKIDASFVSDI 583 Query: 684 GVRAESEVLFNAMVSMAHALRMTVVAEGVETEAQLHLLQALGCDEVQGYYISHPIPAAGI 743 SE + ++ + LRM V EGVETEAQ + ALG +QGY+ + P+PA + Sbjct: 584 EHNPTSEDIVRTVLQLGRNLRMECVVEGVETEAQRDRVAALGATVMQGYHFARPMPAEAV 643 Query: 744 P 744 P Sbjct: 644 P 644 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 110/250 (44%), Positives = 171/250 (68%) Query: 501 ENALRLAIERDEFVLYFQPRVNTMTGEFCSMEALARWQHPVRGIVSPLEFIPVAEETGLI 560 EN L A+ER+E V+Y+QP ++ T + ++EAL RWQHP RG+VSP +FIP+AE GLI Sbjct: 6 ENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAEANGLI 65 Query: 561 LKLGELIIRKACAQLAQWRIAGLPLLPMSVNVSSRQLNQGNLNDIIATALAEHAVDPAQL 620 +++GE ++R AC Q W++AGLP + MSVN+S+RQ + NL ++++ + E + P+ L Sbjct: 66 VEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGLHPSYL 125 Query: 621 EIELTESCMMADAIEVAEELASFRQLGIKLLVDDFGTGYSSLSQLQRLDLDVLKVDKAFT 680 E+E+TES +M D L R+LG+ L +DDFGTGYSSL+ L+R +++LK+D++F Sbjct: 126 ELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKIDRSFV 185 Query: 681 AELGVRAESEVLFNAMVSMAHALRMTVVAEGVETEAQLHLLQALGCDEVQGYYISHPIPA 740 ++ +S + NA++++A +L++ + AEG+ET+ QL LQ GC E QGYY P PA Sbjct: 186 QDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFGIPAPA 245 Query: 741 AGIPLLMQRR 750 I ++Q + Sbjct: 246 KEIMEILQPK 255 >SMc00038_4 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 257 Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/251 (45%), Positives = 169/251 (67%) Query: 497 KIENENALRLAIERDEFVLYFQPRVNTMTGEFCSMEALARWQHPVRGIVSPLEFIPVAEE 556 K++++ LR A+ R+EF+L+FQP+++ TG + EAL RWQHPVRGI+SP FIP+AEE Sbjct: 2 KLQSQEELREALAREEFLLHFQPQMSLETGRIFAAEALLRWQHPVRGIISPAAFIPLAEE 61 Query: 557 TGLILKLGELIIRKACAQLAQWRIAGLPLLPMSVNVSSRQLNQGNLNDIIATALAEHAVD 616 TGLI+ +G+ ++R AC QL W+ AGLP L +SVNVS+RQ + N +A L E ++ Sbjct: 62 TGLIVPIGDWVLRTACRQLKAWQDAGLPPLIVSVNVSARQFRERNWAARVAAVLEETCLE 121 Query: 617 PAQLEIELTESCMMADAIEVAEELASFRQLGIKLLVDDFGTGYSSLSQLQRLDLDVLKVD 676 LE+ELTES +M D + + +G+ L +DDFGTGYSSLS L+R + LK+D Sbjct: 122 ARYLELELTESLIMQDVPGAIATMHALEAIGVHLAIDDFGTGYSSLSALKRFPVRRLKID 181 Query: 677 KAFTAELGVRAESEVLFNAMVSMAHALRMTVVAEGVETEAQLHLLQALGCDEVQGYYISH 736 ++F ++ A+ + +A++S+A L + V+AEGVETEAQ+ LQ GC E+QGY+ S Sbjct: 182 RSFVTDIPHDADDMAITSAIISLAQKLGLRVIAEGVETEAQVEFLQKSGCGEIQGYFFSQ 241 Query: 737 PIPAAGIPLLM 747 P+P +L+ Sbjct: 242 PLPGEDFEVLL 252 >alr3170_3 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 225 bits (573), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 113/255 (44%), Positives = 165/255 (64%), Gaps = 2/255 (0%) Query: 501 ENALRLAIERDEFVLYFQPRVNTMTGEFCSMEALARWQHPVRGIVSPLEFIPVAEETGLI 560 E LR AI R E + +QP V+ TG+ EAL RWQHP RG++SP+EFIPVAEETGLI Sbjct: 6 ETDLRWAIARQELYVVYQPIVSVATGKITGFEALVRWQHPERGLISPVEFIPVAEETGLI 65 Query: 561 LKLGELIIRKACAQLAQWRIA--GLPLLPMSVNVSSRQLNQGNLNDIIATALAEHAVDPA 618 +++G+ ++R++C QL QW + L ++VN+S +Q +Q L + I L E +DP+ Sbjct: 66 IQIGQFVLRESCQQLKQWHLEFPEFQHLSINVNLSGKQFSQPYLVEEIEQLLQEFDLDPS 125 Query: 619 QLEIELTESCMMADAIEVAEELASFRQLGIKLLVDDFGTGYSSLSQLQRLDLDVLKVDKA 678 +++E+TES +MA + A L + LGI+L +DDFGTGYSSL+ L +D+LK+D++ Sbjct: 126 SIKLEITESAIMASPGQAATILQQLKTLGIQLCIDDFGTGYSSLAYLHCFPIDILKIDRS 185 Query: 679 FTAELGVRAESEVLFNAMVSMAHALRMTVVAEGVETEAQLHLLQALGCDEVQGYYISHPI 738 FT + +E + A+V++A L M+VVAEGVET QL LQ L CD+ QGY S P+ Sbjct: 186 FTKRIDSDSEQLAIIRAIVTLASNLEMSVVAEGVETVNQLVQLQLLKCDQAQGYLFSKPL 245 Query: 739 PAAGIPLLMQRRYLF 753 + + LL+ + F Sbjct: 246 SSDKVSLLLAAKIEF 260