BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0064.p (191 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1069 [J] COG0231 Translation elongation factor P (EF-P)/trans... 224 9e-59 NMA1133 [J] COG0231 Translation elongation factor P (EF-P)/trans... 204 7e-53 NMB0937 [J] COG0231 Translation elongation factor P (EF-P)/trans... 204 1e-52 PA2851 [J] COG0231 Translation elongation factor P (EF-P)/transl... 203 2e-52 FN0720 [J] COG0231 Translation elongation factor P (EF-P)/transl... 163 2e-40 >RSc1069 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Rso Ralstonia solanacearum Length = 188 Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 105/187 (56%), Positives = 142/187 (75%), Gaps = 6/187 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPQENVFRGDDKF 60 +K A+E+R GN+ M+ + PM+VL+++ + S R K K KNLLT +P E+VF+ DDK Sbjct: 3 LKIAQELRAGNVFMIGNDPMVVLKTEYSRSGRNAAVVKMKYKNLLTGAPSESVFKADDKM 62 Query: 61 DVVVLDKKAVTYSYFADPLYVFMDSEYNQFEIEGENLGDALGYLKDGMECEAVFYDGKAI 120 D ++LDKK TYSYFADP+YVFMD++YNQ+E+E +++GDA+ YL+DGM E FY+ KAI Sbjct: 63 DQIILDKKECTYSYFADPMYVFMDTDYNQYEVEADSMGDAIHYLEDGMAAEVTFYNEKAI 122 Query: 121 SVELPTTIVRQVVYSEPAVKGNT-SGNVLKEAKIENAIEANQIVVMVPLFVSQDDQIEID 179 SVELPTT+VR++ Y+EPAVKG+T SG VLK AKI+ E + VPLF S D+IEID Sbjct: 123 SVELPTTLVREIEYTEPAVKGDTSSGKVLKMAKIKGGFE-----IQVPLFCSTGDKIEID 177 Query: 180 TRTNEYK 186 TRT+EY+ Sbjct: 178 TRTHEYR 184 >NMA1133 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) NmA Neisseria meningitidis Z2491 Length = 186 Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 98/189 (51%), Positives = 134/189 (70%), Gaps = 7/189 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPQENVFRGDDKF 60 MK A+E+R GN+ MV + PM+V +++ R+ K+KNLLT + E +++ DDKF Sbjct: 1 MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLTGAASETIYKADDKF 60 Query: 61 DVVVLDKKAVTYSYFADPLYVFMDSEYNQFEIEGENLGDALGYLKDGME--CEAVFYDGK 118 DVV+L +K TYSYFADP+YVFMD E+NQ+EIE +N+GDAL ++ DGME CE FY+G Sbjct: 61 DVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALKFIVDGMEDQCEVTFYEGN 120 Query: 119 AISVELPTTIVRQVVYSEPAVKGNTSGNVLKEAKIENAIEANQIVVMVPLFVSQDDQIEI 178 ISVELPT IVR+V Y+EPAVKG+TSG V+K A++ E + V ++ D+IEI Sbjct: 121 PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE-----IQVMSYIENGDKIEI 175 Query: 179 DTRTNEYKK 187 DTRT E++K Sbjct: 176 DTRTGEFRK 184 >NMB0937 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Nme Neisseria meningitidis MC58 Length = 186 Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 97/189 (51%), Positives = 134/189 (70%), Gaps = 7/189 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPQENVFRGDDKF 60 MK A+E+R GN+ MV + PM+V +++ R+ K+KNLLT + E +++ DDKF Sbjct: 1 MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNLLTGAASETIYKADDKF 60 Query: 61 DVVVLDKKAVTYSYFADPLYVFMDSEYNQFEIEGENLGDALGYLKDGME--CEAVFYDGK 118 DVV+L +K TYSYFADP+YVFMD E+NQ+EIE +N+GDAL ++ DGME CE FY+G Sbjct: 61 DVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALKFIVDGMEDQCEVTFYEGN 120 Query: 119 AISVELPTTIVRQVVYSEPAVKGNTSGNVLKEAKIENAIEANQIVVMVPLFVSQDDQIEI 178 ISVELPT IVR+V Y+EPAVKG+TSG V+K A++ E + V ++ D++EI Sbjct: 121 PISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE-----IQVMSYIENGDKVEI 175 Query: 179 DTRTNEYKK 187 DTRT E++K Sbjct: 176 DTRTGEFRK 184 >PA2851 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Pae Pseudomonas aeruginosa Length = 188 Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 100/192 (52%), Positives = 133/192 (69%), Gaps = 7/192 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPQENVFRGDDKF 60 MK A+E R G + ++ P ++ +++ N S R K K+KNLLT + E VF+ DDK Sbjct: 1 MKTAQEFRAGQVANINGAPWVIQKAEFNKSGRNAAVVKMKLKNLLTGAGTETVFKADDKL 60 Query: 61 DVVVLDKKAVTYSYFADPLYVFMDSEYNQFEIEGENLGDALGYLKDGME--CEAVFYDGK 118 + ++LD+K VTYSYFADPLYVFMDSE+NQ+EIE ++L L +++DGM CEAVFY+ K Sbjct: 61 EPIILDRKEVTYSYFADPLYVFMDSEFNQYEIEKDDLEGVLTFIEDGMTDICEAVFYNDK 120 Query: 119 AISVELPTTIVRQVVYSEPAVKGNTSGNVLKEAKIENAIEANQIVVMVPLFVSQDDQIEI 178 ISVELPTTIVRQ+ Y+EPAV+G+TSG V+K A++ N E + V F D IEI Sbjct: 121 VISVELPTTIVRQIAYTEPAVRGDTSGKVMKTARLNNGAE-----LQVSAFCEIGDSIEI 175 Query: 179 DTRTNEYKKVVR 190 DTRT EYK V+ Sbjct: 176 DTRTGEYKSRVK 187 >FN0720 [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) Fnu Fusobacterium nucleatum Length = 187 Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 83/191 (43%), Positives = 126/191 (65%), Gaps = 6/191 (3%) Query: 1 MKFAKEIRVGNIIMVDSKPMIVLRSDVNGSSRTGFTYKWKMKNLLTNSPQENVFRGDDKF 60 MK A+E+R G+ I + + P +VL+++ N S R K+KMKNL++ + + V++ DDK Sbjct: 1 MKIAQELRAGSTIKIGNDPFVVLKAEYNKSGRNAAVVKFKMKNLISGNISDAVYKADDKM 60 Query: 61 DVVVLDKKAVTYSYFADPLYVFMDSE-YNQFEIEGENLGDALGYLKDGMECEAVFYDGKA 119 D + LDK YSY Y+F + E + + E++GE+LGDAL YL++ M + V+Y+ A Sbjct: 61 DDIKLDKVKAIYSYQNGDSYIFSNPETWEEIELKGEDLGDALNYLEEEMPLDVVYYESTA 120 Query: 120 ISVELPTTIVRQVVYSEPAVKGNTSGNVLKEAKIENAIEANQIVVMVPLFVSQDDQIEID 179 ++VELPT + R+V Y+EP ++G+TSG V+K A+I E V VPLFV Q + I+ID Sbjct: 121 VAVELPTFVEREVTYTEPGLRGDTSGKVMKPARINTGFE-----VQVPLFVEQGEWIKID 175 Query: 180 TRTNEYKKVVR 190 TRTNEY + V+ Sbjct: 176 TRTNEYVERVK 186