BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0051.p         (68 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

HI1276_1 [J] COG0143 Methionyl-tRNA synthetase Hin Haemophilus i...    86   3e-17
PM0303_1 [J] COG0143 Methionyl-tRNA synthetase Pmu Pasteurella m...    83   1e-16
RSc2381_1 [J] COG0143 Methionyl-tRNA synthetase Rso Ralstonia so...    83   2e-16
VC1036_1 [J] COG0143 Methionyl-tRNA synthetase Vch Vibrio cholerae     79   2e-15
BU109 [J] COG0143 Methionyl-tRNA synthetase Buc Buchnera sp. APS       78   4e-15

>HI1276_1 [J] COG0143 Methionyl-tRNA synthetase Hin Haemophilus influenzae
          Length = 572

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/48 (68%), Positives = 44/48 (91%)

Query: 17 TSSPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGHEVHFV 64
          T+ PR++ VT ALPYANGA H+GH++E+IQADIWVRFQRM+G+++HFV
Sbjct: 2  TTQPRKILVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNKIHFV 49


>PM0303_1 [J] COG0143 Methionyl-tRNA synthetase Pmu Pasteurella multocida
          Length = 572

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/47 (70%), Positives = 42/47 (89%)

Query: 18 SSPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGHEVHFV 64
          +S R + VT ALPYANGA H+GH++E+IQADIWVRFQRM+GH+VHF+
Sbjct: 3  NSARDILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFI 49


>RSc2381_1 [J] COG0143 Methionyl-tRNA synthetase Rso Ralstonia solanacearum
          Length = 574

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/48 (68%), Positives = 41/48 (85%)

Query: 19 SPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGHEVHFVGG 66
          S R++ VT+ALPYANG  HIGH++EYIQ DIWVRFQRM+GHE ++VG 
Sbjct: 2  SERRILVTSALPYANGPIHIGHMVEYIQTDIWVRFQRMRGHETYYVGA 49


>VC1036_1 [J] COG0143 Methionyl-tRNA synthetase Vch Vibrio cholerae
          Length = 622

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/61 (55%), Positives = 49/61 (80%), Gaps = 1/61 (1%)

Query: 4  FPDHQPKHALPMSTSSPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGHEVHF 63
          F  +Q K  L M+ + PR+L VT ALPYANG+ H+GH++E+IQADIWVR+QR++G+ V+F
Sbjct: 38 FGLYQEKRILSMA-NDPRKLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNF 96

Query: 64 V 64
          +
Sbjct: 97 I 97


>BU109 [J] COG0143 Methionyl-tRNA synthetase Buc Buchnera sp. APS
          Length = 547

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 17 TSSPRQLFVTTALPYANGAFHIGHIMEYIQADIWVRFQRMQGHEVHFV 64
          +S  R++ VT ALPYANG+ HIGH++E+IQADIWVR+ RM+GHEV FV
Sbjct: 2  SSVFRKILVTCALPYANGSIHIGHMLEHIQADIWVRYHRMRGHEVWFV 49