BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0034.p         (83 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0113 [G] COG1175 ABC-type sugar transport systems, permease...    79   2e-15
mll1715 [G] COG1175 ABC-type sugar transport systems, permease c...    79   4e-15
AGpA78 [G] COG1175 ABC-type sugar transport systems, permease co...    73   1e-13
SP1682 [G] COG1175 ABC-type sugar transport systems, permease co...    70   1e-12
SPy0254 [G] COG1175 ABC-type sugar transport systems, permease c...    69   3e-12

>BMEII0113 [G] COG1175 ABC-type sugar transport systems, permease components
           Bme Brucella melitensis
          Length = 270

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 58/80 (72%)

Query: 3   TTLFVLINALINSFRLVDHIVVMTKGGPDNASSLLLYYIYEVGFSFWDSSYAAALTVVLL 62
           TTLFV   ++IN+ ++ + +  +T+GGP+ AS +LL+ IY+ GF +    YA+A+TV+ L
Sbjct: 191 TTLFVTTISIINAVKVFETVKTLTEGGPNKASEVLLWTIYQEGFVYLRVGYASAMTVIFL 250

Query: 63  MMLAVIAFVKFRILDRRTHY 82
            +L ++  ++FR+LDRRTHY
Sbjct: 251 AVLVILMLLQFRVLDRRTHY 270


>mll1715 [G] COG1175 ABC-type sugar transport systems, permease components
           Mlo Mesorhizobium loti
          Length = 307

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 58/81 (71%)

Query: 2   PTTLFVLINALINSFRLVDHIVVMTKGGPDNASSLLLYYIYEVGFSFWDSSYAAALTVVL 61
           PTTLFV+  ++ N+ ++ + + ++T GGP+ AS +LL+ IY+ GF +    YA+A+TVV 
Sbjct: 226 PTTLFVVTISITNAVKVFETVKMLTDGGPNKASEVLLFTIYQEGFVYLRVGYASAMTVVF 285

Query: 62  LMMLAVIAFVKFRILDRRTHY 82
           L +L V+  V++R++DRR HY
Sbjct: 286 LAILVVLMLVQYRVIDRRVHY 306


>AGpA78 [G] COG1175 ABC-type sugar transport systems, permease components
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 323

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 57/83 (68%)

Query: 1   MPTTLFVLINALINSFRLVDHIVVMTKGGPDNASSLLLYYIYEVGFSFWDSSYAAALTVV 60
           MPTT F+L+ ++I +F++   + VMTKGGP  A+ +L+  +YE+GF  +D    +AL V+
Sbjct: 240 MPTTYFLLVISVIEAFQVFTIVNVMTKGGPAGATDMLVSLLYEIGFVLFDIGRGSALAVL 299

Query: 61  LLMMLAVIAFVKFRILDRRTHYQ 83
           L ++L  +A +K RI+ R+ HY+
Sbjct: 300 LFILLVGLAILKSRIIGRKVHYE 322


>SP1682 [G] COG1175 ABC-type sugar transport systems, permease components
           Spn Streptococcus pneumoniae TIGR4
          Length = 298

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 53/82 (64%)

Query: 1   MPTTLFVLINALINSFRLVDHIVVMTKGGPDNASSLLLYYIYEVGFSFWDSSYAAALTVV 60
           +PTTL++ I   INSF+    I ++T GGP+ ++S L+YY+YE  F   +  YA  + V 
Sbjct: 217 LPTTLYIAIITTINSFQCFALIQLLTSGGPNYSTSTLMYYLYEKAFQLTEYGYANTIGVF 276

Query: 61  LLMMLAVIAFVKFRILDRRTHY 82
           L +M+A+++FV+F++L     Y
Sbjct: 277 LAVMIAIVSFVQFKVLGNDVEY 298


>SPy0254 [G] COG1175 ABC-type sugar transport systems, permease components
           Spy Streptococcus pyogenes M1 GAS
          Length = 320

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 52/82 (63%)

Query: 1   MPTTLFVLINALINSFRLVDHIVVMTKGGPDNASSLLLYYIYEVGFSFWDSSYAAALTVV 60
           +PTTL++ +   INSF+    I ++T GGP+ ++S L+YY+YE  F   +  YA  + V 
Sbjct: 239 LPTTLYIAVITTINSFQCFALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVF 298

Query: 61  LLMMLAVIAFVKFRILDRRTHY 82
           L +M+A+I+F +F+IL     Y
Sbjct: 299 LAVMIAIISFAQFKILGNDVEY 320