BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0033.p (277 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value TM0598 [G] COG0395 ABC-type sugar transport system, permease com... 184 2e-46 AGpA79 [G] COG0395 ABC-type sugar transport system, permease com... 176 4e-44 SMb20233 [G] COG0395 ABC-type sugar transport system, permease c... 159 5e-39 Cgl1351 [G] COG0395 ABC-type sugar transport system, permease co... 159 6e-39 CAC0428 [G] COG0395 ABC-type sugar transport system, permease co... 157 2e-38 >TM0598 [G] COG0395 ABC-type sugar transport system, permease component Tma Thermotoga maritima Length = 277 Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/232 (42%), Positives = 149/232 (64%), Gaps = 3/232 (1%) Query: 48 RFSLTAPLT--LQNFVNAWNAAPFPRYFLNTFMLVTMILVAQMVLATMAAYAFSRYRFRG 105 +FS + L QN+V+AWNAAPFPRY+ NTF + T + ++V A++AAYAFS F G Sbjct: 47 KFSFSEVLANIFQNYVDAWNAAPFPRYYFNTFFVATTTTLLEVVTASLAAYAFSWMVFPG 106 Query: 106 DNIMFMLVLMQLMVMPDILIVENYNTMNLLGLRDTILSIGLPYFASAFGIFLLRQTFKTV 165 + +F L L +M+ ++L+V N+ T++ LG DT ++ +P+ S F IFLLRQ F T+ Sbjct: 107 RDFIFGLFLATMMIPGEVLLVPNFITISKLGWIDTYYALIIPWIVSVFAIFLLRQHFLTI 166 Query: 166 PRELDEAATVEGASAMQVLWKVYVPLAKPIYLAFGLVSISTHWNNFLWPLIVTNSVESRP 225 PREL +AA ++G S + LW++ VPL+KP + L+ WN FLW LIVTNS + R Sbjct: 167 PRELFDAAKIDGCSHWRFLWQMVVPLSKPAVITSALLKFVGSWNAFLWVLIVTNSEKYRT 226 Query: 226 LTVGLQVFSSTDQGVDWSIITSATLMTSAPLLLAFLLFQRQFVQSFMRAGIR 277 L VGLQ FSS D G ++++ +A + P+++ F+ Q+ F+Q R G++ Sbjct: 227 LPVGLQAFSS-DVGTQYNLLMAAATFSILPVVILFIFTQKYFIQGIARTGLK 277 >AGpA79 [G] COG0395 ABC-type sugar transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 269 Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 149/260 (57%), Gaps = 5/260 (1%) Query: 21 AWVLGLLWLLPLIYAIWTAFHPAEFATRFSLTAPLTLQNFVNAWNAAPFPRYFLNTFMLV 80 A V GLL+L P++Y+IW +F + ++ TL N+ A F RY LN+ ++ Sbjct: 12 ALVAGLLFLSPVLYSIWMSFQTVD--AYYAGELGFTLDNYARAVGQYNFARYLLNSLIVS 69 Query: 81 TMILVAQMVLATMAAYAFSRYRFRGDNIMFMLVLMQLMVMPDILIVENYNTMNLLGLRDT 140 M+ + + ATMAAYAF+RY F+G + +F + LM+ I ++ NY T+ +GL D+ Sbjct: 70 AMVTLLGITFATMAAYAFARYSFKGGDFLFAATVATLMIPSHISLIPNYLTLAKVGLLDS 129 Query: 141 ILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAMQVLWKVYVPLAKPIYLAFG 200 + LP ++ F F LRQ + +P+ LDEAA ++GA+++QVLW++ VPL++P + Sbjct: 130 YAGLILPAISNGFAAFFLRQYIRGIPKALDEAAYMDGATSLQVLWRIIVPLSRPAIASMA 189 Query: 201 LVSISTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQG---VDWSIITSATLMTSAPLL 257 L T WNN++WPL+ + L +GL + G +DW ++ +A+ +T P+L Sbjct: 190 LYIFMTEWNNYIWPLVAVGKQDMYTLQIGLARLYRINPGEGLIDWPLVMAASTITILPVL 249 Query: 258 LAFLLFQRQFVQSFMRAGIR 277 L FLL +R V+ ++ Sbjct: 250 LGFLLVERHLVRGITMGAVK 269 >SMb20233 [G] COG0395 ABC-type sugar transport system, permease component Sme Sinorhizobium meliloti Length = 282 Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 88/284 (30%), Positives = 159/284 (55%), Gaps = 9/284 (3%) Query: 1 MIAQATNPFGERNKILETVAAW-----VLGLLWLLPLIYAIWTAFHPA--EFATRFSLTA 53 M ++ PF R+++ W +L + L PL++ + AF PA F++ A Sbjct: 1 MSSKRPQPFFSRSQVTLVRGLWMVVTAILAFMTLFPLLWIVSIAFKPAAESFSSNLIPQA 60 Query: 54 PLTLQNFVNAWNAAPFPRYFLNTFMLVTMILVAQMVLATMAAYAFSRYRFRGDNIMFMLV 113 P TL NF+ PF RY +N+F++ + V + TMA YA +R RF G +MF+ + Sbjct: 61 P-TLDNFIYVLTGVPFIRYMVNSFLVSATVTVVALFFHTMAGYALARLRFPGREVMFLSI 119 Query: 114 LMQLMVMPDILIVENYNTMNLLGLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAA 173 +V ++IV + + +G+ ++ + +P +AFGIFLLRQ + ++P+E++EAA Sbjct: 120 FSTFLVSLPVIIVPLFVIVKAMGMLNSYAGLIIPAIFNAFGIFLLRQYYLSLPKEIEEAA 179 Query: 174 TVEGASAMQVLWKVYVPLAKPIYLAFGLVSISTHWNNFLWPLIVTNSVESRPLTVGLQVF 233 ++GA ++ W V +PL++PI A ++ +WN+FLWPL +T+ + + +G+ F Sbjct: 180 RIDGAGYWRIYWSVILPLSRPIMSALAILFFLANWNSFLWPLTITSDPDLWVVQLGIANF 239 Query: 234 SSTDQGVDWSIITSATLMTSAPLLLAFLLFQRQFVQSFMRAGIR 277 S W+ + +A+ + + P L+ F++FQRQ + S +G++ Sbjct: 240 KS-QYSASWNYMMAASTIVAIPTLILFVIFQRQIMDSLKTSGLK 282 >Cgl1351 [G] COG0395 ABC-type sugar transport system, permease component Cgl Corynebacterium glutamicum Length = 278 Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 84/273 (30%), Positives = 157/273 (57%), Gaps = 6/273 (2%) Query: 11 ERNKILETVA--AWVLGLLWL-LPLIYAIWTAF-HPAEFATRFSLTAP--LTLQNFVNAW 64 +RN +++ + VL +L++ LPL++ + T+F +E T+ P N+ N + Sbjct: 5 DRNVLVKIMGYVGMVLAILFIGLPLVFIVLTSFKQQSEIYTQPVTWFPSEFNFDNYANVF 64 Query: 65 NAAPFPRYFLNTFMLVTMILVAQMVLATMAAYAFSRYRFRGDNIMFMLVLMQLMVMPDIL 124 PF YF N+ ++ ++ + +++L ++AYA S RF G N++F+LV+ LMV ++ Sbjct: 65 ERVPFLNYFRNSIIITVILCLVKIILGVISAYALSILRFPGRNLVFLLVISALMVPSEVT 124 Query: 125 IVENYNTMNLLGLRDTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAMQVL 184 ++ NY ++ LG RDT I +P AFG FL+R F ++P EL EAA ++ ++L Sbjct: 125 VISNYALVSQLGWRDTYQGIIVPLAGIAFGTFLMRNHFMSIPSELIEAARMDHCGHFRLL 184 Query: 185 WKVYVPLAKPIYLAFGLVSISTHWNNFLWPLIVTNSVESRPLTVGLQVFSSTDQGVDWSI 244 WKV +P++ P +AF ++++ WN +LWP ++ + S L +GL + + + +W Sbjct: 185 WKVLLPISMPTLVAFSMITVVNEWNQYLWPFLMAETDNSATLPIGLTMLQNNEGVSNWGP 244 Query: 245 ITSATLMTSAPLLLAFLLFQRQFVQSFMRAGIR 277 + +AT+MT P+L+ FL Q+ ++ + ++ Sbjct: 245 VMAATIMTMLPVLVMFLALQQYMIKGLISGAVK 277 >CAC0428 [G] COG0395 ABC-type sugar transport system, permease component Cac Clostridium acetobutylicum Length = 273 Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 152/260 (58%), Gaps = 8/260 (3%) Query: 23 VLGLLWLLPLIYAIWTAFHPAE----FATRFSLTAPLTLQNFVNAWNAAPFPRYFLNTFM 78 +LGL+ ++PLIYA+ + P + F RF + + L N+ + P ++ +N+F+ Sbjct: 16 ILGLITIVPLIYALCVSLMPQDQIFSFPPRF-IPKGIYLGNYKEVLRSVPIIKFIVNSFI 74 Query: 79 LVTMILVAQMVLATMAAYAFSRYRFRGDNIMFMLVLMQLMVMPDILIVENYNTMNLLGLR 138 + + V Q++ ++MAA+AFS F+G I+F+ VL LM+ + ++ NY T+ LG Sbjct: 75 VSLGVTVFQIITSSMAAFAFSFLDFKGKKILFIAVLATLMIPAETTLISNYLTVGSLGWL 134 Query: 139 DTILSIGLPYFASAFGIFLLRQTFKTVPRELDEAATVEGASAMQVLWKVYVPLAKPIYLA 198 D+ ++ +PY SA GIF++RQ + T+P+EL EAA ++G + K+ +P+++P+ + Sbjct: 135 DSYKALIVPYMCSAMGIFMMRQYYLTIPKELYEAAKIDGCGSFGFFTKILMPVSRPVIAS 194 Query: 199 FGLVSISTHWNNFLWPLIVTNSVESRPLTVGLQVFS-STDQGVDWSIITSATLMTSAPLL 257 FG+ S WN +LWPL+VT+ SR + +G+ + S +Q + +I + ++ P + Sbjct: 195 FGIYSFLVSWNQYLWPLLVTSKESSRTVQIGISMLQFSENQ--SFGLIMAGIVIVLLPSI 252 Query: 258 LAFLLFQRQFVQSFMRAGIR 277 + F++ Q+Q V ++ Sbjct: 253 VIFIIGQKQLVDGMTSGAVK 272