BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0022.p         (104 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc01511 [P] COG0609 ABC-type Fe3+-siderophore transport system,...   112   3e-25
RSc2399 [P] COG0609 ABC-type Fe3+-siderophore transport system, ...   112   3e-25
BH1586 [P] COG0609 ABC-type Fe3+-siderophore transport system, p...   104   5e-23
BS_yvrB [P] COG0609 ABC-type Fe3+-siderophore transport system, ...   100   6e-22
VCA0914 [P] COG0609 ABC-type Fe3+-siderophore transport system, ...   100   1e-21

>SMc01511 [P] COG0609 ABC-type Fe3+-siderophore transport system, permease
           component Sme Sinorhizobium meliloti
          Length = 366

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 77/103 (74%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           +GVPV RL+   + + + AT A+V ++G IGFVG+VVPH LRL++G D R LLPA+AL G
Sbjct: 260 MGVPVQRLKNIAVFSVAGATGASVAVSGGIGFVGIVVPHLLRLVIGPDHRYLLPASALLG 319

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSRA 104
           G  L  AD+ ART+V+P +LP+G+ITA +G P FLW+L R R+
Sbjct: 320 GTLLIFADMLARTIVSPAELPIGIITAFVGAPFFLWVLLRGRS 362


>RSc2399 [P] COG0609 ABC-type Fe3+-siderophore transport system, permease
           component Rso Ralstonia solanacearum
          Length = 335

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 76/101 (75%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGVPV R+R      ASL TA AVT+AG++ FVGL+VPH +RL   +D R+ LPA A+AG
Sbjct: 233 LGVPVARVRALIYVVASLCTAVAVTIAGSVAFVGLLVPHMVRLAWTHDVRIHLPATAMAG 292

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G  L LADL ART++AP QLPVGVIT L+GVP FL+LL RS
Sbjct: 293 GGLLMLADLIARTLIAPAQLPVGVITTLLGVPTFLYLLMRS 333


>BH1586 [P] COG0609 ABC-type Fe3+-siderophore transport system, permease
           component Bha Bacillus halodurans
          Length = 353

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 72/103 (69%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V R +   L +AS+ T +AV ++GTIGFVGLV+PH  RL+ G D R LLP + + G
Sbjct: 247 LGVNVKRRKYMILISASILTGSAVAVSGTIGFVGLVIPHITRLVAGPDHRHLLPLSMMIG 306

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSRA 104
              LTL DL ARTV+AP +LP+GVITA++G P+F  LL R R 
Sbjct: 307 AGFLTLTDLFARTVIAPTELPIGVITAIVGAPVFGLLLIRQRK 349


>BS_yvrB [P] COG0609 ABC-type Fe3+-siderophore transport system, permease
           component Bsu Bacillus subtilis
          Length = 353

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 72/103 (69%)

Query: 1   LLGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALA 60
           LLGV V + ++  L A SL T +AV ++GTIGFVGLV+PH  RLL G D R LLP +AL 
Sbjct: 245 LLGVSVQQRKMMILIAGSLLTGSAVAVSGTIGFVGLVIPHITRLLWGTDHRHLLPLSALL 304

Query: 61  GGAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSR 103
           G   L LADL +RT++ P++LP+G+IT+L G P+F  +L R  
Sbjct: 305 GAGFLVLADLLSRTIIEPIELPIGIITSLAGAPVFALILIRQH 347


>VCA0914 [P] COG0609 ABC-type Fe3+-siderophore transport system, permease
           component Vch Vibrio cholerae
          Length = 343

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 71/102 (69%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGVPV +L+   +  +++    AV+ AG IGFVGLVVPH  R+LVG D R L+P + L G
Sbjct: 238 LGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLG 297

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSR 103
              LTLAD+ AR  VAP +LP+G++TAL+G P FL+LL + +
Sbjct: 298 ALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339