BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0099.p         (346 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VCA0848 [T] COG2199 FOG Vch Vibrio cholerae                           168   2e-41
PA3177 [T] COG2199 FOG Pae Pseudomonas aeruginosa                     117   3e-26
PA5487 [T] COG2199 FOG Pae Pseudomonas aeruginosa                     113   8e-25
VCA0217 [T] COG2199 FOG Vch Vibrio cholerae                           112   1e-24
sll1687_3 [T] COG2199 FOG Syn Synechocystis                           112   2e-24

>VCA0848 [T] COG2199 FOG Vch Vibrio cholerae
          Length = 326

 Score =  168 bits (425), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 148/254 (58%), Gaps = 26/254 (10%)

Query: 100 ADGWHVLWLPVWL--HGKVNTCLEI-RNPHAYDTTALELIDGIFGIYCNYQSLLDYSERD 156
           A+G +  + P+ +  H     CL + ++P  Y      LI+G   IY NY  +L  SERD
Sbjct: 92  ANGQYQCFCPIPIEEHFSAELCLILNKDPEPYRM----LINGFAKIYRNYTVILHESERD 147

Query: 157 ALTGLFNRKTFDEQFSRHAFALAP--HEAHSLDNNERRNGGETKAHWLAVVDIDHFKQVN 214
            LTGL NR+T +++  RH FA+ P   E H L              W+A++DIDHFK +N
Sbjct: 148 KLTGLLNRRTLEDRL-RHTFAINPSTEENHKL--------------WIAMLDIDHFKAIN 192

Query: 215 DQFGHLYGDEVLILVANILRTSFRAHDRIFRFGGEEFVILLRSTTLADASKIFDRFRQHV 274
           D FGH+ GDE+L++ A  ++  F    ++FRFGGEEFVI+  S       +  D FRQ +
Sbjct: 193 DHFGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQI 252

Query: 275 QEYDFPQVGKVTVSLGFVGISQ-ETPVVILGHADQALYHAKKNGRNRICYYDELVTSG-V 332
           + ++FP++G+++ S GF  +   +    IL HAD+ALY+AK++GRN++  Y++L  +G +
Sbjct: 253 RRHNFPRIGELSFSAGFCSLRPGDYLPTILDHADKALYYAKEHGRNQVHCYEQLCENGKI 312

Query: 333 LSNEISTNDIVEFF 346
            S +   +D VE F
Sbjct: 313 ASAQRPFSDDVELF 326


>PA3177 [T] COG2199 FOG Pae Pseudomonas aeruginosa
          Length = 307

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 101/180 (56%), Gaps = 19/180 (10%)

Query: 146 YQSLLDYSERDALTGLFNRKTFDEQFSRHAFALAPHEAHSLDNNERRNGGETKAHWLAVV 205
           Y++ +  + RDALTG  NR   D+   R    LA           RRN    +   + ++
Sbjct: 140 YRAAIQTALRDALTGTGNRIAMDQALGRE-LELA-----------RRN---LQPLSVLML 184

Query: 206 DIDHFKQVNDQFGHLYGDEVLILVANILRTSFRAHDRIFRFGGEEFVILLRSTTLADASK 265
           DIDHFK+VND +GH  GDE L  VA  ++   R  D +FRFGGEEF++LL ST L  A  
Sbjct: 185 DIDHFKRVNDHYGHAVGDEALKAVAETIKDHLRNVDMVFRFGGEEFLVLLSSTPLQAACM 244

Query: 266 IFDRFRQHVQEYDFPQVG---KVTVSLGFVGISQ-ETPVVILGHADQALYHAKKNGRNRI 321
           + +R RQ V+E D+   G   K+++SLG   +   E    +L   D+ALY AK++GRNR+
Sbjct: 245 VGERLRQAVEELDYRHAGEPLKLSISLGCADLRPGEGSDDLLRRVDEALYEAKRDGRNRL 304


>PA5487 [T] COG2199 FOG Pae Pseudomonas aeruginosa
          Length = 671

 Score =  113 bits (282), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 90/170 (52%), Gaps = 19/170 (11%)

Query: 156 DALTGLFNRKTFDEQFSRHAFALAPHEAHSLDNNERRNGGETKAHWLAVVDIDHFKQVND 215
           D LTGL NR    E+  +                  R+GG+     LAV+DIDHFK++ND
Sbjct: 514 DPLTGLPNRAALSERLEQEVA------------RRHRDGGDL---LLAVLDIDHFKRIND 558

Query: 216 QFGHLYGDEVLILVANILRTSFRAHDRIFRFGGEEFVILLRSTTLADASKIFDRFRQHVQ 275
            FGHL GD+VL ++A  LR   R  D I RFGGEEFV+LL +T+L    ++ +R R  + 
Sbjct: 559 DFGHLAGDKVLKIIAGELRKRLRQADFIARFGGEEFVVLLPATSLEAGRQLLERLRAAIA 618

Query: 276 EYDFPQVGK---VTVSLGFVGI-SQETPVVILGHADQALYHAKKNGRNRI 321
              F   G+   +T S G       E    +   ADQALY AK+ GR+R+
Sbjct: 619 ACPFHFKGEPLSITCSAGITAFEGNEAGEAVFERADQALYRAKRAGRDRL 668


>VCA0217 [T] COG2199 FOG Vch Vibrio cholerae
          Length = 359

 Score =  112 bits (280), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 96/178 (53%), Gaps = 22/178 (12%)

Query: 153 SERDALTGLFNRKTFD---EQFSRHAFALAPHEAHSLDNNERRNGGETKAHWLAVVDIDH 209
           S R ALTG  NR   D   ++  RH                R+   E+    +AV+DIDH
Sbjct: 179 STRHALTGTLNRHQLDGFLKKCLRH----------------RQLANESAV--IAVIDIDH 220

Query: 210 FKQVNDQFGHLYGDEVLILVANILRTSFRAHDRIFRFGGEEFVILLRSTTLADASKIFDR 269
           FK VND +GH  GD+V+  V  I+ T  R  D +FR GG+EF++L  +T+L DA+ +   
Sbjct: 221 FKSVNDLYGHDTGDKVITQVVEIMNTHCRELDLLFRLGGDEFLLLFENTSLTDATLVMSH 280

Query: 270 FRQHVQEYDFPQVGKVTVSLGFV-GISQETPVVILGHADQALYHAKKNGRNRICYYDE 326
               +Q+  +P   KVTVS+G    +  + P      ADQALYH+KK G+NR+ + +E
Sbjct: 281 IGCRIQQTHYPYHAKVTVSVGLAEALRTDDPEQWFKRADQALYHSKKMGKNRVSFDEE 338


>sll1687_3 [T] COG2199 FOG Syn Synechocystis
          Length = 181

 Score =  112 bits (279), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 97/187 (51%), Gaps = 21/187 (11%)

Query: 147 QSLLDYSERDALTGLFNRKTFDEQFSRHAFALAPHEAHSLDNNERRNGGETKAHWLAVVD 206
           + L + S RD LTGLFNR+ + EQF       A    HS+               + + D
Sbjct: 6   ERLENQSIRDPLTGLFNRR-YLEQFFLQEIGRAKRYNHSI--------------GVIMGD 50

Query: 207 IDHFKQVNDQFGHLYGDEVLILVANILRTSFRAHDRIFRFGGEEFVILLRSTTLADASKI 266
           IDHFKQ NDQ GH  GD VL  +  IL+++ R  D   R+GGEE  I+L  T+L D    
Sbjct: 51  IDHFKQFNDQLGHDAGDHVLKTIGRILQSNIRGSDIACRYGGEEMTIVLPQTSLEDTLVK 110

Query: 267 FDRFRQHVQ----EYDFPQVGKVTVSLGFVGISQ--ETPVVILGHADQALYHAKKNGRNR 320
            +  RQ +     EY   ++G +TVSLG        ET V I+  AD+ALY AK  GRNR
Sbjct: 111 AESLRQAIASMEVEYKGKELGTLTVSLGVACYPNHGETMVNIIQAADRALYQAKAAGRNR 170

Query: 321 ICYYDEL 327
           +   DE+
Sbjct: 171 VVMADEV 177