BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0057.p (283 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0977 [M] COG0741 Soluble lytic murein transglycosylase and re... 243 3e-64 RSc2291 [M] COG0741 Soluble lytic murein transglycosylase and re... 109 8e-24 XF0907 [M] COG0741 Soluble lytic murein transglycosylase and rel... 102 1e-21 mlr9248 [M] COG0741 Soluble lytic murein transglycosylase and re... 97 5e-20 CAC1100 [M] COG0741 Soluble lytic murein transglycosylase and re... 91 4e-18 >RSc0977 [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Rso Ralstonia solanacearum Length = 285 Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 125/259 (48%), Positives = 167/259 (64%), Gaps = 27/259 (10%) Query: 40 PAHADVYGYIDADGVAHVSTEKIDERYQLFMRGDATFDSDKIA------------RGVPG 87 PA ADVYGYID +G+AH + E++D+RY LFM+G A + IA R G Sbjct: 21 PARADVYGYIDENGLAHFAAERLDDRYVLFMKGTAVAGASGIAQPAGDPPDADADRNAAG 80 Query: 88 VETKAN--LSSPLMKLMLQHPNLKKYEAMLDQSAKEFSVEPALLKAIMAAESGFNPTAVS 145 + N + L + +LQHPN+ + E ++ Q+A++ V+PAL+KA++AAESGFNP AVS Sbjct: 81 RDAPDNDGMRRRLARAVLQHPNVPRVEPLIRQAARKHGVDPALVKAVIAAESGFNPQAVS 140 Query: 146 PKGAIGLMQIMPETAERYGVQGDRRKTIQQKLTDPKINIRLAARYLRDLQMLFPKRLELA 205 PKGAIGLMQ++PET ERYGV GD R+T+ QKL DP++NI RYL DL +F LELA Sbjct: 141 PKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPRVNIATGVRYLSDLLRMFSGDLELA 200 Query: 206 IASYNAGERAVQKYNNQIPPYPETRNYVQLVAQFYQLYQP-------------GAGNNAG 252 +A+YNAGE AVQK+ N IPPY ET+NYV+ V QFY+ Y P GA Sbjct: 201 LAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNPVTAAPGLMTVSAGGAMATTR 260 Query: 253 NNAGNADASKPRRVEIILP 271 + + +PRR+E++LP Sbjct: 261 KPGHSGHSGRPRRIELVLP 279 >RSc2291 [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Rso Ralstonia solanacearum Length = 198 Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 85/132 (64%), Gaps = 9/132 (6%) Query: 110 KYEAMLDQSAKEFSVEPALLKAIMAAESGFNPTAVSPKGAIGLMQIMPETAERYGVQGDR 169 ++ ++ ++ ++++VEP LL+AI+A ES FNP AVS +GA GLMQ+MP TA R+ GD Sbjct: 69 RFSDIIAEAGRKWNVEPELLRAIIAVESKFNPRAVSKRGARGLMQLMPGTARRF-TAGD- 126 Query: 170 RKTIQQKLTDPKINIRLAARYLRDLQMLFPKRLELAIASYNAGERAVQKYNNQIPPYPET 229 L DP+ N+ A+YLR L LF +ELA+A+YNAGE AV + +IP ET Sbjct: 127 -------LFDPRANVLAGAQYLRFLLDLFGNDVELAVAAYNAGENAVIRAGYRIPALAET 179 Query: 230 RNYVQLVAQFYQ 241 R+YV V Y+ Sbjct: 180 RSYVPAVMARYR 191 >XF0907 [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Xfa Xylella fastidiosa 9a5c Length = 297 Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 86/233 (36%), Positives = 111/233 (47%), Gaps = 39/233 (16%) Query: 19 LRSGALSAAAALTLSLTAAPV-PAHA---------DVYGYIDADGVAHVSTEKIDERYQL 68 ++ +SA + ++L +APV PA A VY YI DGV H S+ R Sbjct: 73 VKDAVVSAPSVGGVALMSAPVRPAVAGGGKRLVSGQVYSYIQ-DGVRHYSSSA--PRQTA 129 Query: 69 FMRGDATFDSDKIARGV-----PGVETKANLSSPLMKLMLQHPNLKKYEAMLDQSAKEFS 123 + G T I PGV S PL N Y + +A +F Sbjct: 130 SVHGLRTISYSFIETCYACAPNPGVNFG---SVPL--------NTSAYHGEIVSAAGQFG 178 Query: 124 VEPALLKAIMAAESGFNPTAVSPKGAIGLMQIMPETAERYGVQGDRRKTIQQKLTDPKIN 183 VE AL++AI+ AES +NP ++S GA GLMQ+MP TA R+GV DP N Sbjct: 179 VEEALVRAIIHAESSYNPLSLSSAGAQGLMQLMPGTARRFGVTDS---------YDPLQN 229 Query: 184 IRLAARYLRDLQMLFPKRLELAIASYNAGERAVQKYNNQIPPYPETRNYVQLV 236 IR +YL L F L LA A YNAGE AV +Y +PPY ET+ YV+ V Sbjct: 230 IRGGVQYLAWLLKRFNGNLTLAAAGYNAGEGAVDRYGG-VPPYSETQRYVERV 281 >mlr9248 [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Mlo Mesorhizobium loti Length = 283 Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 15/139 (10%) Query: 114 MLDQSAKEFSVEPALLKAIMAAESGFNPTAVSPKGAIGLMQIMPETAERYGVQGDRRKTI 173 +++ A++ P L+ A+ AES FN A+SPKGA GLMQ++P TAE YGV Sbjct: 100 IVETVARQQGFAPPLVLAVARAESRFNSGALSPKGAYGLMQLLPSTAESYGV-------- 151 Query: 174 QQKLTDPKINIRLAARYLRDLQMLFPKRLELAIASYNAGERAVQKYNNQIPPYPETRNYV 233 + DP N++ +LRDL FP + + +A+YNAGE AV KY +PPY ET YV Sbjct: 152 --DICDPADNVKGGIGFLRDLHRRFPNPIYM-LAAYNAGEVAVLKYKG-VPPYTETVGYV 207 Query: 234 -QLVAQFYQLYQPGAGNNA 251 ++ FYQ P G+ A Sbjct: 208 ANVINDFYQW--PSVGSEA 224 >CAC1100 [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) Cac Clostridium acetobutylicum Length = 183 Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 11/154 (7%) Query: 102 MLQHPNLKKYEAMLDQSAKEFSVEPALLKAIMAAESGFNPTAVSPKGAIGLMQIMPETAE 161 +L+H +Y + +++ +KE ++P + A++ ES FN +A S K A GLMQI PETAE Sbjct: 24 ILKHFYPVRYVSYIEKYSKENDIDPYFVMAVIRVESNFNASARSNKDAYGLMQITPETAE 83 Query: 162 RYGVQGDRRKTIQQKLTDPKINIRLAARYLRDLQMLFPKRLELAIASYNAGERAVQKY-N 220 + + L+DP+INI++ YL+DL F L +A+YN G V+K+ N Sbjct: 84 WAAEKMGLQNFKVDDLSDPEINIKIGCWYLKDLSSEFGGDQTLILAAYNGGRGNVKKWLN 143 Query: 221 NQIP----------PYPETRNYVQLVAQFYQLYQ 244 N+ PY ET YV+ V Y++Y+ Sbjct: 144 NKTNSKDGKTLHYIPYGETSKYVKKVMMDYKVYK 177