BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0003.p         (158 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0360 Non COG                                                       103   2e-22
Z4864 [I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein...    87   1e-17
ECs4339 [I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier prote...    87   1e-17
NMB1701 [I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier prote...    73   3e-13

>RSp0360 Non COG
          Length = 158

 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 3/149 (2%)

Query: 8   PQIAALVPHAAPMLLLDRVISVDADKLCAQVAIVDDSLFLTGTGTGVGAWVGIEYMAQAI 67
           P+I  ++PH   MLLL  V + D + L A  A VD + +       + AW GIE MAQAI
Sbjct: 10  PRIEDILPHRGSMLLLAHVDTWDDETLRAS-AHVDPTAWYADPEGAMPAWFGIELMAQAI 68

Query: 68  AAWAGYHAQQRGEAVRIGFLLGSRRYDASVPYFATGSTLHVEVEKLLQADNGLGSFACSI 127
           AA  G  + + G   R G LLGSR+Y+A  P FA    L + V+++L++  G G++AC+I
Sbjct: 69  AAHVGLLSMREGNPARPGVLLGSRKYEAHAPAFAPAQPLSIAVQEVLRSTEGHGAYACTI 128

Query: 128 RDADSQQQLAQATISVFQPHDTREFLQES 156
             A   + LAQA I V+QP D + F++ S
Sbjct: 129 --AAGGRDLAQAVIKVYQPTDFQAFIEGS 155


>Z4864 [I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein)
           dehydratase EcZ Escherichia coli O157:H7 EDL933
          Length = 154

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 11/140 (7%)

Query: 11  AALVPHAAPMLLLDRVISVDADKLCAQVAIVDDSL---FLTGTGTGVGAWVGIEYMAQAI 67
            A +PH APMLLL+ V+SV  D    +V +    +   FL   G   G W  +E MAQ +
Sbjct: 8   GAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPG-WFTLELMAQTV 66

Query: 68  AAWAGYHAQQRGE-AVRIGFLLGSRRYDASVPYFATGSTLHVEVEKLLQADNGLGSFACS 126
             W+G+H  Q+G+ ++ +G +LG+R    +      G TL + V KLL  D+  GSF CS
Sbjct: 67  GVWSGWHRHQQGKNSIELGMILGARELLCTTGILPAGQTLTITV-KLLMQDDRFGSFECS 125

Query: 127 IRDADSQQQLAQATISVFQP 146
           I D +     A   I+ FQP
Sbjct: 126 INDGE-----ATGRINTFQP 140


>ECs4339 [I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein)
           dehydratase Ecs Escherichia coli O157:H7
          Length = 154

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 11/140 (7%)

Query: 11  AALVPHAAPMLLLDRVISVDADKLCAQVAIVDDSL---FLTGTGTGVGAWVGIEYMAQAI 67
            A +PH APMLLL+ V+SV  D    +V +    +   FL   G   G W  +E MAQ +
Sbjct: 8   GAYLPHDAPMLLLEDVVSVSDDSAVCRVTVSPSGVLAPFLDPDGNLPG-WFTLELMAQTV 66

Query: 68  AAWAGYHAQQRGE-AVRIGFLLGSRRYDASVPYFATGSTLHVEVEKLLQADNGLGSFACS 126
             W+G+H  Q+G+ ++ +G +LG+R    +      G TL + V KLL  D+  GSF CS
Sbjct: 67  GVWSGWHRHQQGKNSIELGMILGARELLCTTGILPAGQTLTITV-KLLMQDDRFGSFECS 125

Query: 127 IRDADSQQQLAQATISVFQP 146
           I D +     A   I+ FQP
Sbjct: 126 INDGE-----ATGRINTFQP 140


>NMB1701 [I] COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein)
           dehydratase Nme Neisseria meningitidis MC58
          Length = 166

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)

Query: 1   MQTEKQFP--QIAALVPHAAPMLLLDRVISVDADKLCAQVAIVDDSLFLTGTGTGVGAWV 58
           M T  + P    A+L+PH+  M+L+DR+     D + A   +  + + L        A+ 
Sbjct: 1   MDTLPECPITNTASLLPHSGRMVLIDRITRYGDDFVEAGAQVSPNHILLLDDKLPYTAF- 59

Query: 59  GIEYMAQAIAAWAGYHAQQRGEAVRIGFLLGSRRYDASVPYFATGSTLHVEVEKLLQADN 118
            IE MAQA+ A+AG  A++   +VR+GFLLG+R+ +        G+ L       +Q   
Sbjct: 60  -IELMAQAVGAYAGIQARKNARSVRLGFLLGTRKLEIFAQSVPIGTHLLATAHMSIQDAG 118

Query: 119 GLGSFACSIRDADSQQQ----------LAQATISVFQP 146
           G+G F C +R  D+ +           LA+A+++V+ P
Sbjct: 119 GMGVFDCELRWTDAPETSSETLPSDGILARASLNVYSP 156