BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0232.p (432 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VNG2422G_2 [C] COG0247 Fe-S oxidoreductase Hbs Halobacterium sp.... 213 9e-55 Cgl2262_2 [C] COG0247 Fe-S oxidoreductase Cgl Corynebacterium gl... 201 4e-51 VCA0749 [C] COG0247 Fe-S oxidoreductase Vch Vibrio cholerae 129 1e-29 VNG6379C_2 [C] COG0247 Fe-S oxidoreductase Hbs Halobacterium sp.... 124 4e-28 STM2286 [C] COG0247 Fe-S oxidoreductase Sty Salmonella typhimuri... 123 8e-28 >VNG2422G_2 [C] COG0247 Fe-S oxidoreductase Hbs Halobacterium sp. NRC-1 Length = 428 Score = 213 bits (541), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 144/413 (34%), Positives = 206/413 (49%), Gaps = 19/413 (4%) Query: 8 PGSGGDRSDGLAKLVEMCNNNGHC---RKFDAGTMCPSYRVTHDEKHVTRGRANTVRLAL 64 P D +G + E+C+ C + G MCP+YR ++E TRGRAN +R A+ Sbjct: 3 PALNWDTENGFRGMTELCHGCAGCTGHQDTTGGVMCPTYRAANEETLSTRGRANMLRSAM 62 Query: 65 SGQLGSEGLASPEVKEVLDLCVSCKGCKRDCPTGVDMAKVKIEARAAWAGKNGISLRDRL 124 +G L ++ L + EVLDLCV CKGCK DCP+GVDMAK+K E + A +G+ + DRL Sbjct: 63 NGHLPADPLDDEFLTEVLDLCVGCKGCKLDCPSGVDMAKLKTEVKHASHQADGVGVLDRL 122 Query: 125 IAYMPAYASHAGSVGGALALAEKIPVISGWVKGLLGLAPQRSLPRFRKSFL------SNA 178 + A ++ A +P + LG+A +R LP FR+ L Sbjct: 123 FGHTEALFHLGSALAPVSNWATALPGAGALAEKTLGIAAERDLPTFRRESLRAWFDARGG 182 Query: 179 QRAPATNADKEVLLFVDTFNNSMEPENARAAQQVLEAAGYRVHFNTLPGQRPLCCGRTYL 238 R P A+ VLL D + N +AA +VLEAAG V G GR Sbjct: 183 SRVPEAAAEHTVLLAPDPYTNYSTVAVGKAAVRVLEAAGVHVALPDGVGTS----GRPAY 238 Query: 239 AAGLVDQAKAEARRTLDALMPYVRRGIAVVGLEPSCLLSLRDEFLNYGYGEEAQQLAKSA 298 + GL+D+ + AR + AL P V G VV +EPS + ++D++ + A +A + Sbjct: 239 SRGLIDRTRRIARENVAALAPKVADGWDVVYVEPSDAVMVQDDYHDLLSSAPAASVAANT 298 Query: 299 FLFEEFLVQEHKAGKLKLDLKPLSSNKIVLHGHCHQKAFDAFRPVPAVLQWIPQAEVAVV 358 + E+L + D + HGHCHQKA VL+ EV + Sbjct: 299 YGVCEYLDRHGLDAAAGFDAD---GESLAYHGHCHQKAQQRDHHAVGVLRRAGY-EVDPL 354 Query: 359 ESSCCGMAGSFGYEEEHYEASMAMAELSLLPAIRKAAAEAIVVADGTSCRHQI 411 +S+CCGMAGSFGYE EHY S A+A++ L + + A+ V A G+SCR Q+ Sbjct: 355 DSTCCGMAGSFGYEAEHYSMSQAIADI-LADQVADSDAD-TVTAPGSSCRSQL 405 >Cgl2262_2 [C] COG0247 Fe-S oxidoreductase Cgl Corynebacterium glutamicum Length = 404 Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 139/423 (32%), Positives = 217/423 (51%), Gaps = 43/423 (10%) Query: 25 CNNNGHCRKFDAGTMCPSYRVTHDEKHVTRGRANTVRLALSGQLGSEGLASPEVKEVLDL 84 C CR ++ MCPS+++T DE H TRGRA + G+ ++G S EV E LDL Sbjct: 1 CVGVSACRS-ESDAMCPSFQITGDEVHSTRGRARLLSEMFRGESIADGYRSEEVNEALDL 59 Query: 85 CVSCKGCKRDCPTGVDMAKVKIE-ARAAWAGKNGISLRDRLIAYMPAYASHAGSVGGALA 143 C+SCK C +CP VDM+ K E +AG+ LR + Y+ + G V Sbjct: 60 CLSCKACASECPVNVDMSTYKAEFLDKHYAGR----LRP-MAHYVMGWLPLLGHV----- 109 Query: 144 LAEKIPVISGWVKGLLGLAPQRSLPRFRK-------SFLSNAQRA-----PATNADKEVL 191 A KIP++ + + A + P RK +S A R+ P N+ + V+ Sbjct: 110 -AHKIPLLPTLIDATMQSA--LTAPVVRKVGGLADRPLISFAHRSLRKYKPKKNSGETVV 166 Query: 192 LFVDTFNNSMEPENARAAQQVLEAAGYRVHFNTLPGQRPLCCGRTYLAAGLVDQAKAEAR 251 L+ D+FN +++ A AA + LEA GY V +P +CCG T+ + G + K Sbjct: 167 LWPDSFNTNLDTGPAHAAIKTLEALGYNV---VIPDGF-VCCGLTWHSTGQLSMTKKVLE 222 Query: 252 RTLDALMPYVRRGIAVVGLEPSCLLSLRDEFLNYGYGEEAQQLAKSAFLFEEF----LVQ 307 +T + PY+ +G+ VVGLEPSC + L+DE + +LA F E + + Sbjct: 223 QTAKVMKPYLDQGLTVVGLEPSCTVMLQDEATELSDNPDLARLAALTKPFAEVIAPKITE 282 Query: 308 EHKAGKLKLDLKPLSSNKIVLHGHCHQKAFDAFRPVPAVLQWIPQAEVAVVESSCCGMAG 367 ++G L+ L+ + + HCH+++ + VL+ + + + + CCG+AG Sbjct: 283 LVESGSLQ-----LTESTALTQVHCHERSLGDPQQSALVLEALGVKDEQIA-TGCCGLAG 336 Query: 368 SFGYEEEHYEASMAMAELSLLPAIRKAAAEAIVVADGTSCRHQIHDGAGREAVHVARVLA 427 ++G+E++H E S A+ E L P +RK AE V+ADG SCR QI G G++A H+A V+ Sbjct: 337 NWGFEKDHAEMSFALGERELFPKVRK--AEGHVIADGFSCRTQIEQGTGKQATHLAEVVL 394 Query: 428 AAL 430 + L Sbjct: 395 SIL 397 >VCA0749 [C] COG0247 Fe-S oxidoreductase Vch Vibrio cholerae Length = 413 Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 170/361 (47%), Gaps = 19/361 (5%) Query: 80 EVLDLCVSCKGCKRDCPTGVDMAKVKIEARAAWAGK--NGISLRDRLIAYMPAYASHAGS 137 + L LC +CK C+ CP+GV + + AR + K N +RD ++++ + S A Sbjct: 60 DALKLCTNCKRCETACPSGVKIGDMIAVARGKYGKKPLNPKLVRDFVLSHTDLFGSIATP 119 Query: 138 VGGALALAEKIPVISGWVKGLLGLAPQRSLPR-----FRKSFLSNAQRAPATNADKEVLL 192 + A +P++ + +G+ ++LP+ FR+ F N P ++V Sbjct: 120 FAPLVNAATSLPLVKKLMHKTIGVHDHKTLPKYSHGTFRRWFKQNCTSQPL--YQRQVAY 177 Query: 193 FVDTFNNSMEPENARAAQQVLEAAGYRVHFNTLPGQRPLCCGRTYLAAGLVDQAKAEARR 252 F + N P+ + +V+ A V L ++ CCG +A G ++A+ A Sbjct: 178 FHGCYVNYNHPQLGKDFVRVMNAMNIGVRL--LDSEK--CCGVPLIANGFHNKARKNALH 233 Query: 253 TLDALMPYVRRGIA-VVGLEPSCLLSLRDEFLNYGYGEEAQQLAKSAFLFEEFLVQEHKA 311 + L V A V+ +C +L+ E+ + G + Q+ FL++E + Sbjct: 234 NVKHLTAMVNDYHAPVLSTSSTCSFTLQQEY-PHVLGVDNSQVVDQIHYVTRFLLKEFMS 292 Query: 312 GKLKLDLKPLSSNKIVLHGHCHQKAFDAFRPVPAVLQWIPQAEVAVVESSCCGMAGSFGY 371 G +KP+ K+V H CH + +L+ +P E+ V++S CCG+AG++G+ Sbjct: 293 GNAP-KMKPVHK-KVVYHTPCHLERSGNVMFTIELLKMVPGLELVVLDSECCGLAGTYGF 350 Query: 372 EEEHYEASMAMAELSLLPAIRKAAAEAIVVADGTSCRHQIHDGAGREAVHVARVLAAALA 431 +EE+YE S + L AI+ + A+ V D +C+ QI + A E +H +LA AL Sbjct: 351 KEENYEVSKKIGS-HLFDAIQTSDAD-YAVTDCETCKWQIEENAHLETIHPVSLLAMALI 408 Query: 432 N 432 + Sbjct: 409 D 409 >VNG6379C_2 [C] COG0247 Fe-S oxidoreductase Hbs Halobacterium sp. NRC-1 Length = 410 Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 107/375 (28%), Positives = 161/375 (42%), Gaps = 39/375 (10%) Query: 80 EVLDLCVSCKGCKRDCPTGVDMAKVKIEARAAWA-GKNG-----------------ISLR 121 E DLC C C CP +D+ + R GK+G + L+ Sbjct: 44 EFNDLCTGCSRCVNQCPVNIDIPWINTVVRDRINRGKDGDLDFLVEGLTPDEEPGGVDLQ 103 Query: 122 DRLIAYMPAYASHAGSVGGALALAEKIPVISGWVKGLL----GLAPQRSLPRFRKSFLSN 177 RL A +G A A +G + LL G+ +R LP F + L Sbjct: 104 KRLFGNFDTLAK----LGSAFAPLSNWAARTGPARSLLERTLGVDSRRELPEFERESLVE 159 Query: 178 --AQRAPATNAD---KEVLLFVDTFNNSMEPENARAAQQVLEAAGYRVHFNTLPGQRPLC 232 +R P D ++V L+ D + N + E +AA +VLEA RV + P Sbjct: 160 WFEKRGPRVGRDEARRQVALYPDAYTNYVRTERGKAAVRVLEALDIRV--DVPPAGE--- 214 Query: 233 CGRTYLAAGLVDQAKAEARRTLDALMPYVRRGIAVVGLEPSCLLSLRDEFLNYGYGEEAQ 292 GR L+ G+V A++ A DA+ P + G VV +EPS L E+ ++ Sbjct: 215 SGRAPLSQGMVSTAQSNANAVYDAIAPAIAAGHDVVVIEPSDLAMFHREYERLLPEDDYA 274 Query: 293 QLAKSAFLFEEFLVQEHKAGKLKLDLKPLSSN-KIVLHGHCHQKAFDAFRPVPAVLQWIP 351 L + ++ E++ + G +D+ P + +I H HC Q+ D AVL+ Sbjct: 275 ALQEHSYELMEYVYGLLENGA-DIDVLPGGGDERIAYHSHCQQRTLDLEPYTVAVLEDC- 332 Query: 352 QAEVAVVESSCCGMAGSFGYEEEHYEASMAMAELSLLPAIRKAAAEAIVVADGTSCRHQI 411 +V + CCGMAGSFGY+ E+YE S+ + E + + A+ VVA GTSC Q+ Sbjct: 333 GFDVTTSDVECCGMAGSFGYKSEYYELSVDVGETLVDQFTTEDTADRTVVASGTSCLEQL 392 Query: 412 HDGAGREAVHVARVL 426 R H R+L Sbjct: 393 DALLTRRPAHPVRLL 407 >STM2286 [C] COG0247 Fe-S oxidoreductase Sty Salmonella typhimurium LT2 Length = 396 Score = 123 bits (309), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 167/355 (47%), Gaps = 14/355 (3%) Query: 80 EVLDLCVSCKGCKRDCPTGVDMAKVKIEARAAWAGKNGISLRDRLIAYMPAYASHAGSVG 139 E L C++CK C+ CP+ V + + ARA + SLR+ ++++ S + Sbjct: 51 EALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRP-SLRNFILSHTDLMGSVSTPFA 109 Query: 140 GALALAEKIPVISGWVKGLLGLAPQRSLPRFRKSFLSNAQRAPATNADK---EVLLFVDT 196 + A + + + L + +R+LP++ R+ A K +V F Sbjct: 110 PVVNTATALKPVRQLLDYALKIDHRRTLPKYSFGTFRRWYRSVAAQQAKYKDQVAFFHGC 169 Query: 197 FNNSMEPENARAAQQVLEAAGYRVHFNTLPGQRPLCCGRTYLAAGLVDQAKAEARRTLDA 256 F N P+ + +VL A G V + + CCG +A G D+A+ +A +++ Sbjct: 170 FVNYNHPQLGKDLIKVLNAMGTGVQLLS----KEKCCGVPLIANGFTDKARKQAISNVES 225 Query: 257 LMPYVR-RGIAVVGLEPSCLLSLRDEFLNYGYGEEAQQLAKSAFLFEEFLVQEHKAGKLK 315 L + +GI V+ +C +LRDE+ + A L + L +L ++ AGK Sbjct: 226 LREAIAVKGIPVIATSSTCTFALRDEYPEVLDVDNAG-LREHIELATRWLWRKLDAGK-T 283 Query: 316 LDLKPLSSNKIVLHGHCHQKAFDAFRPVPAVLQWIPQAEVAVVESSCCGMAGSFGYEEEH 375 L L PL K+V H CH + +L+ IP E+ V++S CCG+AG++G+++E+ Sbjct: 284 LPLNPLPL-KVVYHTPCHMEKMGWTLYTLELLRQIPGLELTVLDSQCCGIAGTYGFKKEN 342 Query: 376 YEASMAMAELSLLPAIRKAAAEAIVVADGTSCRHQIHDGAGREAVHVARVLAAAL 430 Y S ++ L I ++ A+ IVV D +C+ QI + H +LA AL Sbjct: 343 YPTSQSIGA-PLFRQIEESGAD-IVVTDCETCKWQIEMSTSKRCEHPITLLAQAL 395