BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0225.p         (116 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA5303 [J] COG0251 Putative translation initiation inhibitor, yj...   139   2e-33
XF1711 [J] COG0251 Putative translation initiation inhibitor, yj...   131   3e-31
RSc1575 [J] COG0251 Putative translation initiation inhibitor, y...   129   1e-30
SMc00791 [J] COG0251 Putative translation initiation inhibitor, ...   125   3e-29
HI1627 [J] COG0251 Putative translation initiation inhibitor, yj...   124   7e-29

>PA5303 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Pae Pseudomonas aeruginosa
          Length = 117

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 82/115 (71%), Gaps = 1/115 (0%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           M +QR H  +R+S+  +HNGTVYLAGQ+ ED +  +E QTRE L  I+RLL EAG+ K  
Sbjct: 1   MPIQRQHTNERMSQIVVHNGTVYLAGQVGEDMSAGVEQQTRETLAAIERLLEEAGTDKTR 60

Query: 61  ILSCQIYIADVK-DFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAA 114
           ILS  IY+ D+  DFEGMN VWD W+  G  P RATVEAKL  PE+LVE+ +VAA
Sbjct: 61  ILSVTIYLKDIDADFEGMNRVWDQWLPRGVAPARATVEAKLCEPEILVEMSVVAA 115


>XF1711 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Xfa Xylella fastidiosa 9a5c
          Length = 117

 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/112 (54%), Positives = 76/112 (67%)

Query: 3   VQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEHIL 62
           +QR   G R+SE  ++ G  YLAGQ++ED +  I GQT +VL  IDRLLA A S K  IL
Sbjct: 5   LQRFETGVRMSEMTVYRGVCYLAGQVSEDASVGIRGQTEQVLAEIDRLLALAASDKSKIL 64

Query: 63  SCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAA 114
             +I++AD+ DF GMN VWDAWV  G TP R TV+AKLA P   VEI++ AA
Sbjct: 65  RAEIFLADINDFSGMNEVWDAWVPQGFTPARMTVQAKLADPAWKVEIMVTAA 116


>RSc1575 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Rso Ralstonia solanacearum
          Length = 131

 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/115 (53%), Positives = 81/115 (70%), Gaps = 1/115 (0%)

Query: 3   VQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQ-NIEGQTREVLGHIDRLLAEAGSSKEHI 61
           ++R +V  R S+AA++NG VY+AGQ+ E T   +I  QT EVL  IDR+LA  GS K  I
Sbjct: 16  LKRYNVEHRYSDAAVYNGVVYVAGQVPETTLDGDIAAQTAEVLATIDRVLAANGSDKTRI 75

Query: 62  LSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAAQK 116
           L CQI++ D+ +   MNAVWD WVA GN PPRATVEA LA P+  +EI++ AA+K
Sbjct: 76  LMCQIFLKDIAEIGAMNAVWDQWVAPGNAPPRATVEAALANPKYRIEIVVTAARK 130


>SMc00791 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Sme Sinorhizobium meliloti
          Length = 114

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 80/114 (70%), Gaps = 1/114 (0%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTTQNIEGQTREVLGHIDRLLAEAGSSKEH 60
           M ++R   G R+S+A ++N TVYLAGQ+  +   ++  QT++ L  +DRLLA AG+ K  
Sbjct: 1   MEIKRFETGPRMSQAVVYNNTVYLAGQVG-NAGDDVVTQTKQALAEVDRLLALAGTDKTR 59

Query: 61  ILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVAA 114
           ILS  +++AD+ DF  MN+VWDAWV  G+ P RAT EAKLA PE LVE+I+ AA
Sbjct: 60  ILSATVWLADMADFAKMNSVWDAWVPQGHAPARATGEAKLATPEYLVEVIVTAA 113


>HI1627 [J] COG0251 Putative translation initiation inhibitor, yjgF family
           Hin Haemophilus influenzae
          Length = 116

 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 1/114 (0%)

Query: 1   MTVQRLHVGKRLSEAAIHNGTVYLAGQIAEDTT-QNIEGQTREVLGHIDRLLAEAGSSKE 59
           MT+QR+    RLSE +IHN   Y AGQ+ E T  QN   QT+EVLG ID+LLA+ GS+K 
Sbjct: 1   MTIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAKIGSNKS 60

Query: 60  HILSCQIYIADVKDFEGMNAVWDAWVASGNTPPRATVEAKLARPELLVEIIIVA 113
           +IL+ QI++AD+KD+  +N  WD WV   + P RATVEAKLA P   VEI+I+A
Sbjct: 61  NILTAQIFLADMKDYAQLNQAWDEWVDHVSPPSRATVEAKLADPHWKVEIVIIA 114