BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0079.p         (92 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2095 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster ...   117   5e-27
PA1524 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster a...    82   3e-16
SMb21286 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster...    79   3e-15
BMEI1576 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster...    77   1e-14
AGc4202 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster ...    72   4e-13

>RSc2095 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Rso Ralstonia solanacearum
          Length = 516

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 70/88 (79%), Gaps = 1/88 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK +R+LGD++Y+GQV ++  + ++D WLEIGA  TLE+AYA L   YP EL+EMW+RF
Sbjct: 250 VTKQLRELGDLLYVGQVADLCALDKRDGWLEIGAAATLEQAYAFLAEDYP-ELTEMWRRF 308

Query: 61  ASLPVRNAGTLGGNVANGSPIGXRTSAI 88
            SLP+RNAGTLGGN+ANGSPIG    A+
Sbjct: 309 GSLPIRNAGTLGGNIANGSPIGDSAPAL 336


>PA1524 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Pae Pseudomonas aeruginosa
          Length = 484

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VT+  R+L  +IY+G + E++ I    + LEIGA   L   Y AL   YPD   E+ QRF
Sbjct: 231 VTQFHRELPVMIYVGHIREMKRIEVGANCLEIGAATPLTDCYQALAADYPD-FGELLQRF 289

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
           ASL +RN GTLGGN+ N SPIG
Sbjct: 290 ASLQIRNQGTLGGNIGNASPIG 311


>SMb21286 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Sme Sinorhizobium meliloti
          Length = 493

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MRD+  ++++  +EE+R I    D + + AGV+  +AY  +   +P +L E+W R 
Sbjct: 236 VTKFMRDIAPVVHLSHLEELRRISIAPDGITLAAGVSYTEAYPVIVRNFP-QLRELWDRI 294

Query: 61  ASLPVRNAGTLGGNVANGSPIGXRTSAI 88
               VRN GT+GGN+ANGSPIG    A+
Sbjct: 295 GGEQVRNMGTVGGNIANGSPIGDTPPAL 322


>BMEI1576 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Bme Brucella melitensis
          Length = 519

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MRD+  +++IG +EE+  I  ++  + IGAGVT  +A+  L G+ P  L ++  R 
Sbjct: 263 VTKMMRDISPVVFIGHLEELHSIREENGVVTIGAGVTYTQAFGFLAGRIP-ALGQLINRI 321

Query: 61  ASLPVRNAGTLGGNVANGSPIG 82
               VRN GT+GGN+ANGSPIG
Sbjct: 322 GGEQVRNMGTIGGNIANGSPIG 343


>AGc4202 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 489

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 1   VTKHMRDLGDIIYIGQVEEIRHIVRQDDWLEIGAGVTLEKAYAALTGQYPDELSEMWQRF 60
           VTK MR L  +I+I  + +++ I   +D + +GAGVT  +A+  +   +P  L+ ++ R 
Sbjct: 233 VTKQMRALNPVIFINNLGDLQTITVGEDGITLGAGVTYSQAFKTIAEHFP-PLARLFDRL 291

Query: 61  ASLPVRNAGTLGGNVANGSPIGXRTSAI 88
               VRN GT+GGN+ANGSPIG    A+
Sbjct: 292 GGEQVRNMGTIGGNIANGSPIGDTPPAL 319