BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0078.p         (182 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2095 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster ...   193   2e-49
SMb21286 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster...   171   1e-42
SMb21011 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster...   163   2e-40
mlr5134 Non COG                                                       156   2e-38
BMEI1576 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster...   155   7e-38

>RSc2095 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Rso Ralstonia solanacearum
          Length = 516

 Score =  193 bits (491), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/171 (59%), Positives = 126/171 (73%), Gaps = 2/171 (1%)

Query: 2   PWLIALGTEIVLYGVDGQRIMPLEDFYIAYQKSAILPNEFVQAVRVPL--PHKDVAFRVY 59
           P LIALG  +VL   D  R +PLED Y+AY K A++P EFV ++RVP       + FR Y
Sbjct: 334 PALIALGARVVLQRGDAHRELPLEDLYLAYMKHAMVPGEFVASLRVPARAGRDALRFRTY 393

Query: 60  KLSKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMAATPKRAAQAEAALNGKEWNEANV 119
           KLSKRFD+DISAVCAA A  L+GG V  AR+AYGGMAAT KRA + EAA+ GK W+EA  
Sbjct: 394 KLSKRFDEDISAVCAALAIELDGGIVRSARIAYGGMAATSKRAPETEAAITGKPWDEATA 453

Query: 120 KAAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLETRADAPLPAASVS 170
           +AAM A+++DYAPL+DMRA+  YR  +A N +YR+WLETR DAPLPAA ++
Sbjct: 454 RAAMAAMSRDYAPLTDMRATEHYRRTSAANTVYRFWLETRPDAPLPAAQIN 504


>SMb21286 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Sme Sinorhizobium meliloti
          Length = 493

 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 84/159 (52%), Positives = 110/159 (69%), Gaps = 1/159 (0%)

Query: 2   PWLIALGTEIVLYGVDGQRIMPLEDFYIAYQKSAILPNEFVQAVRVPLPHKDVAFRVYKL 61
           P LIALG  + L     +R +PLE F+I Y K    P EFV+ VR+P   +   F VYK+
Sbjct: 320 PALIALGASVTLRKGTSRRTLPLEAFFIEYGKQDREPGEFVETVRIPFLDETERFAVYKI 379

Query: 62  SKRFDQDISAVCAAFAFRLEG-GKVIDARMAYGGMAATPKRAAQAEAALNGKEWNEANVK 120
           +KRFD+DISAVC AF  +L+G GKV D  +A+GGMA TPKRA+  EAAL G +WN+A ++
Sbjct: 380 TKRFDEDISAVCGAFRVKLDGDGKVADVAIAFGGMAGTPKRASNVEAALKGAQWNDAAIE 439

Query: 121 AAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLETR 159
           A + AL +D+ PL+D RASS YRM  A+NLL R+ LET+
Sbjct: 440 AGVAALERDFTPLTDWRASSEYRMLVARNLLRRFHLETQ 478


>SMb21011 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Sme Sinorhizobium meliloti
          Length = 495

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/157 (52%), Positives = 104/157 (66%)

Query: 2   PWLIALGTEIVLYGVDGQRIMPLEDFYIAYQKSAILPNEFVQAVRVPLPHKDVAFRVYKL 61
           P LI LG  + L   DGQR +PLEDF+IAY K    P EFV+++ VP    D  F  YK+
Sbjct: 325 PPLIVLGATVTLRSKDGQRTLPLEDFFIAYGKQDRRPGEFVESLFVPALPADERFAAYKI 384

Query: 62  SKRFDQDISAVCAAFAFRLEGGKVIDARMAYGGMAATPKRAAQAEAALNGKEWNEANVKA 121
           SKR D+DISA+  AF   L+G +V  AR+A+GGMAATPKRA   EAAL G+ W E  V+ 
Sbjct: 385 SKRRDEDISALLGAFRISLDGDRVKTARIAFGGMAATPKRAKTVEAALIGQAWTEETVRT 444

Query: 122 AMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLET 158
           A  A   DY P++D RA+ AYRM  A+NLL R++LE+
Sbjct: 445 AQAAFETDYQPITDWRATGAYRMLAAKNLLMRFFLES 481


>mlr5134 Non COG
          Length = 493

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/158 (51%), Positives = 104/158 (65%), Gaps = 1/158 (0%)

Query: 2   PWLIALGTEIVLYGVDGQRIMPLEDFYIAYQKSAILPNEFVQAVRVPLPHKDVAFRVYKL 61
           P LIALG  + L     +R +PLE F+IAY +    P EFV+AV VP+P K   F VYK+
Sbjct: 321 PPLIALGARLTLRKGQKRRTIPLEAFFIAYGRQDRQPGEFVEAVHVPVPAKGEKFAVYKI 380

Query: 62  SKRFDQDISAVCAAFAFRL-EGGKVIDARMAYGGMAATPKRAAQAEAALNGKEWNEANVK 120
           +KR D+DI+A   AF   L + G V D R+AYGGMAATPKRA+  E AL GK W E  V+
Sbjct: 381 TKRRDEDITAALGAFLLTLAKDGTVADVRIAYGGMAATPKRASFVEKALLGKPWTEETVE 440

Query: 121 AAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLET 158
            AM   A D+ PL+DMRAS+ YR   A+NLL R+++ET
Sbjct: 441 TAMAQYAGDFTPLTDMRASAEYRALAAKNLLLRFFVET 478


>BMEI1576 [F] COG4630 Xanthine dehydrogenase, iron-sulfur cluster and
           FAD-binding subunit A Bme Brucella melitensis
          Length = 519

 Score =  155 bits (391), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 83/158 (52%), Positives = 105/158 (66%), Gaps = 1/158 (0%)

Query: 2   PWLIALGTEIVLYGVDGQRIMPLEDFYIAYQKSAILPNEFVQAVRVPLPHKDVAFRVYKL 61
           P LIALG  + L     +R + LEDF+IAY K      EFV+AV VPLP +   F  YK+
Sbjct: 347 PPLIALGATLTLRKGAERRTIALEDFFIAYGKQDRGAGEFVEAVHVPLPGEGSRFAAYKV 406

Query: 62  SKRFDQDISAVCAAFAFRLEG-GKVIDARMAYGGMAATPKRAAQAEAALNGKEWNEANVK 120
           SKR ++DI+A   AF   L+  G V   R+AYGGMAATPKRA   E AL GK W EA V+
Sbjct: 407 SKRREEDITASLGAFHLMLDAAGNVAHIRIAYGGMAATPKRAHAVETALMGKPWTEATVE 466

Query: 121 AAMLALAQDYAPLSDMRASSAYRMRTAQNLLYRYWLET 158
           AA+ A AQDY PL+DMRA++ YR+  A+N+L R++LET
Sbjct: 467 AALEAYAQDYTPLTDMRATAEYRLLVARNMLRRFYLET 504