BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0077.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2096 [F] COG4631 Xanthine dehydrogenase, molybdopterin-bindin...   148   5e-36
BMEI1575 [F] COG4631 Xanthine dehydrogenase, molybdopterin-bindi...   109   3e-24
AGc4204 [F] COG4631 Xanthine dehydrogenase, molybdopterin-bindin...   107   9e-24
mlr5135 [F] COG4631 Xanthine dehydrogenase, molybdopterin-bindin...   105   3e-23
SMb21287 [F] COG4631 Xanthine dehydrogenase, molybdopterin-bindi...   101   7e-22

>RSc2096 [F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B
           Rso Ralstonia solanacearum
          Length = 792

 Score =  148 bits (373), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 6/131 (4%)

Query: 1   MNKQTEEFMSVKSAQASWTE------VGKPHPHESAILHVTGEATYTDDIVELQGTLHAA 54
           MNKQTE F+  ++  A+  +      VG   PHESA LHV G ATYTDDI EL GTLHAA
Sbjct: 1   MNKQTESFLLAQADIAAAAQAGRGAVVGVSRPHESAHLHVAGTATYTDDIPELAGTLHAA 60

Query: 55  LGLSGKAHAKLRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIKDDPVLAEDLVQYVGQ 114
           LG+S + HA++  +DL++VK + GV+AV+TAADIPG N CG I+ DDP+LA   V YVGQ
Sbjct: 61  LGMSTQPHARIAHLDLARVKQAPGVIAVFTAADIPGTNDCGPILHDDPILAAGTVHYVGQ 120

Query: 115 PIFVVIADSHD 125
           P+F+V+A SHD
Sbjct: 121 PVFLVVATSHD 131


>BMEI1575 [F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B
           Bme Brucella melitensis
          Length = 781

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 74/113 (65%), Gaps = 1/113 (0%)

Query: 21  VGKPHPHESAILHVTGEATYTDDIVELQGTLHAALGLSGKAHAKLRSIDLSKVKASVGVV 80
           V     H+SA  HVTG A Y DDI E +GTLH  +G +  AH +++S+DL  V+A+ GVV
Sbjct: 18  VATEQKHDSAHKHVTGTAVYIDDIPEPEGTLHIGVGYASVAHGRIKSMDLEAVRAAPGVV 77

Query: 81  AVYTAADIPGENQCG-AIIKDDPVLAEDLVQYVGQPIFVVIADSHDNARRAAR 132
            + T  D+PGEN    + + DDP+ A D V++ GQPIF VIA + D ARRAAR
Sbjct: 78  DILTCKDVPGENDVSPSGMHDDPIFAVDKVEFHGQPIFAVIAKTRDQARRAAR 130


>AGc4204 [F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 779

 Score =  107 bits (267), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 84/130 (64%), Gaps = 5/130 (3%)

Query: 9   MSVKSAQASWTEVGKPH----PHESAILHVTGEATYTDDIVELQGTLHAALGLSGKAHAK 64
           M   S   + TE+  P      H+SA  HVTG A Y DDI E  G +H ALGL+ +AHA+
Sbjct: 1   MDTTSFDKTKTEIDGPMHTSLRHDSAHKHVTGSAEYIDDIPEPAGLVHGALGLADRAHAE 60

Query: 65  LRSIDLSKVKASVGVVAVYTAADIPGENQCGAIIK-DDPVLAEDLVQYVGQPIFVVIADS 123
           + S+DLS+V+A+ GV+ V    D+PGEN   +  + D+P+LAE  V++ GQPIF V A++
Sbjct: 61  IVSMDLSEVEATPGVLWVMVGKDVPGENDVSSGGRHDEPLLAETKVEFHGQPIFAVFAET 120

Query: 124 HDNARRAARR 133
            D AR+AAR+
Sbjct: 121 RDIARKAARK 130


>mlr5135 [F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B
           Mlo Mesorhizobium loti
          Length = 782

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 1/107 (0%)

Query: 27  HESAILHVTGEATYTDDIVELQGTLHAALGLSGKAHAKLRSIDLSKVKASVGVVAVYTAA 86
           H+SA  HV+G A Y DD+ E  GTLH  LGLS  AHA +  +DLS V+A+ GVV V TA 
Sbjct: 25  HDSAHKHVSGTAVYIDDMPEPSGTLHGCLGLSAAAHATITRMDLSAVRAASGVVDVLTAK 84

Query: 87  DIPGENQCGAIIK-DDPVLAEDLVQYVGQPIFVVIADSHDNARRAAR 132
           D+PGEN      + D+PVLA+  V++ GQ IF VIA++ + ARRA R
Sbjct: 85  DVPGENDISPTGRHDEPVLADGKVEFFGQSIFCVIAETREQARRATR 131


>SMb21287 [F] COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B
           Sme Sinorhizobium meliloti
          Length = 777

 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 64/100 (64%), Gaps = 1/100 (1%)

Query: 27  HESAILHVTGEATYTDDIVELQGTLHAALGLSGKAHAKLRSIDLSKVKASVGVVAVYTAA 86
           HES   HV+G A Y DDI E  GTLH  LGLS +AHA++ S+D   V+ S GVV V TA 
Sbjct: 20  HESGHKHVSGTAEYIDDIPEPAGTLHGYLGLSQRAHAEILSVDFEAVRNSPGVVGVLTAE 79

Query: 87  DIPGENQCGAIIK-DDPVLAEDLVQYVGQPIFVVIADSHD 125
           DIPGEN      K DDPV A   V++ GQPIF VIA S +
Sbjct: 80  DIPGENDISPAHKHDDPVFAAGKVEFHGQPIFAVIATSRE 119