BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0036.p (298 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1564_1 [GEPR] COG0477 Permeases of the major facilitator supe... 204 1e-52 VC1966_1 [GEPR] COG0477 Permeases of the major facilitator super... 166 5e-41 NMB1515 [GEPR] COG0477 Permeases of the major facilitator superf... 155 1e-37 NMA1715 [GEPR] COG0477 Permeases of the major facilitator superf... 154 3e-37 PA3267_1 [GEPR] COG0477 Permeases of the major facilitator super... 144 3e-34 >RSc1564_1 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 434 Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 115/211 (54%), Positives = 138/211 (65%), Gaps = 3/211 (1%) Query: 1 MSQSSQFSLLGQRRFAPFFWTQFLGALNDNVFKTALLTILTYDALSWTDIDTGLLNNLIP 60 MSQSSQFSLL QRRFAPFFWTQFLGA+NDNVFK A +++TY A + + D LI Sbjct: 1 MSQSSQFSLLKQRRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLIS 60 Query: 61 GLFILPFFLFSATAGQLADKMEKGRLARYVKLLEIAIMGIAAYGWMTHHLWLLVVAVAGM 120 +FI PF L SAT+GQ+AD+M+K RL R VK LEIAIM I G+ + LL + M Sbjct: 61 AIFIAPFVLLSATSGQIADRMDKARLIRLVKTLEIAIMAIGCAGFALRRVELLYLCTFLM 120 Query: 121 GVHSTIFGPVKYAYLPQQLKPQELIGGNGVIEMGTFVGILLGEVIGAVLVVHKPFGLEMV 180 GVHST+FGPVKYAYLPQ L+P EL+GGNG++EMGTFV ILLG + G L G E+V Sbjct: 121 GVHSTLFGPVKYAYLPQHLQPSELVGGNGLVEMGTFVAILLGTIGGGELANLTRNG-ELV 179 Query: 181 AAITIGFAXGNGAQPRFFAPQPPGVPVDPGQ 211 G A A + + GVPV P Sbjct: 180 GPALTGIACLAIAVGGWLTAR--GVPVSPAS 208 >VC1966_1 [GEPR] COG0477 Permeases of the major facilitator superfamily Vch Vibrio cholerae Length = 429 Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 87/157 (55%), Positives = 107/157 (68%) Query: 8 SLLGQRRFAPFFWTQFLGALNDNVFKTALLTILTYDALSWTDIDTGLLNNLIPGLFILPF 67 +LL +RRF P+F TQFLGA NDN+FK LL + + I + L NL GLFILPF Sbjct: 10 ALLTERRFLPYFITQFLGAFNDNIFKNVLLLFVAFAGPQALPISSNLFINLAAGLFILPF 69 Query: 68 FLFSATAGQLADKMEKGRLARYVKLLEIAIMGIAAYGWMTHHLWLLVVAVAGMGVHSTIF 127 FLFSATAG LADK+EK R R+VKLLEIAIM A G++T + + + MG S F Sbjct: 70 FLFSATAGVLADKLEKSRYIRWVKLLEIAIMLCGAIGFITQSYGISLFLLFLMGTQSAFF 129 Query: 128 GPVKYAYLPQQLKPQELIGGNGVIEMGTFVGILLGEV 164 GPVKYA LPQQLK +EL+ GN ++E GTF+ ILLG + Sbjct: 130 GPVKYALLPQQLKSEELVPGNALVETGTFLAILLGTL 166 >NMB1515 [GEPR] COG0477 Permeases of the major facilitator superfamily Nme Neisseria meningitidis MC58 Length = 436 Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 119/201 (59%), Gaps = 5/201 (2%) Query: 9 LLGQRRFAPFFWTQFLGALNDNVFKTALLTILTYDALSWTD-IDTGLLNNLIPGLFILPF 67 L+ RRFAP F TQFLGA NDNVFKTAL ++ + L + G + NL LFILP+ Sbjct: 10 LVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFYGLGQNGFLPAGQMLNLGALLFILPY 69 Query: 68 FLFSATAGQLADKMEKGRLARYVKLLEIAIMGIAAYGWMTHHLWLLVVAVAGMGVHSTIF 127 FLFS+ +GQL +K +K LAR+VK+LE+ IM +AAYG+ LL+ + MG ST+F Sbjct: 70 FLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAVAAYGFYIRSAPLLLACLFCMGAQSTLF 129 Query: 128 GPVKYAYLPQQLKPQELIGGNGVIEMGTFVGILLGEVIGAVLVVHKPFGLEMVAAITIGF 187 GP+KYA LP L +EL+ GN +IE GTFV IL G+++G + P+ + I + Sbjct: 130 GPLKYAILPDYLDDKELMMGNSLIESGTFVAILFGQILGTAVAGVPPY----IVGILVLL 185 Query: 188 AXGNGAQPRFFAPQPPGVPVD 208 G F P P D Sbjct: 186 VAVGGTVGSLFMPSVPAKAAD 206 >NMA1715 [GEPR] COG0477 Permeases of the major facilitator superfamily NmA Neisseria meningitidis Z2491 Length = 436 Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 88/201 (43%), Positives = 118/201 (58%), Gaps = 5/201 (2%) Query: 9 LLGQRRFAPFFWTQFLGALNDNVFKTALLTILTYDALSWTD-IDTGLLNNLIPGLFILPF 67 L+ RRFAP F TQFLGA NDNVFKTAL ++ + L + G + NL LFILP+ Sbjct: 10 LVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFYGLGQNGFLPAGQMLNLGALLFILPY 69 Query: 68 FLFSATAGQLADKMEKGRLARYVKLLEIAIMGIAAYGWMTHHLWLLVVAVAGMGVHSTIF 127 FLFS+ +GQL +K +K LAR+ K+LE+ IM +AAYG+ LL+ + MG ST+F Sbjct: 70 FLFSSLSGQLGNKFDKAVLARWAKVLEMIIMAVAAYGFYIRSAPLLLACLFCMGAQSTLF 129 Query: 128 GPVKYAYLPQQLKPQELIGGNGVIEMGTFVGILLGEVIGAVLVVHKPFGLEMVAAITIGF 187 GP+KYA LP L +EL+ GN +IE GTFV IL G+++G + P+ + I + Sbjct: 130 GPLKYAILPDYLDDKELMMGNSLIESGTFVAILFGQILGTAVAGVPPY----IVGILVLL 185 Query: 188 AXGNGAQPRFFAPQPPGVPVD 208 G F P P D Sbjct: 186 VAVGGTVGSLFMPSVPAKAAD 206 >PA3267_1 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 428 Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 91/175 (52%), Positives = 116/175 (66%), Gaps = 2/175 (1%) Query: 1 MSQSSQFSLLGQRRFAPFFWTQFLGALNDNVFKTALLTILTYDALSWTDIDTGLLNNLIP 60 M+Q SQF+LLG+RRF PFF TQ LGA NDN+FK +L+ + Y LS + D LL NL Sbjct: 1 MTQHSQFALLGKRRFLPFFITQLLGAFNDNIFKQSLILAILYH-LSVSG-DRSLLVNLCA 58 Query: 61 GLFILPFFLFSATAGQLADKMEKGRLARYVKLLEIAIMGIAAYGWMTHHLWLLVVAVAGM 120 LFILPFFLFSA GQ +K K L R +KL E+ IM + A G++ L L+ VA+ M Sbjct: 59 LLFILPFFLFSALGGQFGEKYNKDALMRALKLAEVGIMLVGAAGFVFGSLPLMFVALFAM 118 Query: 121 GVHSTIFGPVKYAYLPQQLKPQELIGGNGVIEMGTFVGILLGEVIGAVLVVHKPF 175 G HS +FGPVKY+ LPQ L EL+GGN ++EMGTF+ IL G + VL+ H + Sbjct: 119 GTHSALFGPVKYSILPQHLHEDELVGGNALVEMGTFLAILAGTIGAGVLMSHAHY 173