BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0006.p         (141 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc02522 [IQR] COG1028 Dehydrogenases with different specificiti...   167   5e-42
mlr2780 [IQR] COG1028 Dehydrogenases with different specificitie...   144   5e-35
SMc00268 [IQR] COG1028 Dehydrogenases with different specificiti...   122   3e-28
mll5766 [IQR] COG1028 Dehydrogenases with different specificitie...   112   3e-25
TM1724 [IQR] COG1028 Dehydrogenases with different specificities...   109   2e-24

>SMc02522 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Sme Sinorhizobium
           meliloti
          Length = 256

 Score =  167 bits (424), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 107/140 (76%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           VQ+N  SVV  TR ++P++RK     I+N  S++AR GG PG+ IY+A+K FV+T ++ +
Sbjct: 116 VQLNQTSVVEMTRTMLPLLRKGTHPAIVNTVSISARMGGSPGSSIYSATKAFVATYSKAL 175

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLAS 120
           A+EL PD IRVN V+PG I T F ER++TPE+LE+ RKTIP+GR+G   +C  A+L+LA+
Sbjct: 176 ARELAPDGIRVNCVSPGTITTDFHERYSTPEKLEATRKTIPLGRLGTAEDCAPAYLFLAA 235

Query: 121 DALSGYVTGQIIDVNGGQYM 140
            ALSGY+TGQ+++VNGGQ +
Sbjct: 236 HALSGYITGQVLEVNGGQLI 255


>mlr2780 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Mlo Mesorhizobium
           loti
          Length = 260

 Score =  144 bits (363), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 107/141 (75%), Gaps = 1/141 (0%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           + +NARSV+  +R  +P ++KQGG  I+N +S+AAR+G G GA +Y ++K FVS +TRGM
Sbjct: 121 MDLNARSVLTASRKAMPWLKKQGG-FIVNTSSIAARNGAGGGAGLYGSAKAFVSNVTRGM 179

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLAS 120
           AKEL    IRVNAVAPG I+TPF ER++T EQ++    TIP GR G   +C GA+L+L+S
Sbjct: 180 AKELIGFGIRVNAVAPGTILTPFHERYSTDEQIKGMVATIPQGRAGTAEDCVGAYLFLSS 239

Query: 121 DALSGYVTGQIIDVNGGQYMP 141
           + LSGY+TGQ+I+VNGGQ MP
Sbjct: 240 NLLSGYITGQVIEVNGGQLMP 260


>SMc00268 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Sme Sinorhizobium
           meliloti
          Length = 252

 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/141 (46%), Positives = 90/141 (63%), Gaps = 2/141 (1%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGP-GALIYAASKGFVSTITRG 59
           + +N R  +  ++AVIP MR +  G I+N++SV+A+ GGG  G   Y+A+K  V  +T+ 
Sbjct: 112 LDVNLRGTLYCSQAVIPHMRSRKQGKIVNLSSVSAQRGGGIFGGPHYSAAKAGVLGLTKA 171

Query: 60  MAKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLA 119
           MA+EL PDN+RVNA+ PG I T       TPE+LE  +  IPMGR G   +  G  L+LA
Sbjct: 172 MARELAPDNVRVNAICPGFIATDITGGLLTPEKLEEIKAGIPMGRPGTADDVAGCALFLA 231

Query: 120 SDALSGYVTGQIIDVNGGQYM 140
           SD LS YVTG  +DVNGG  +
Sbjct: 232 SD-LSAYVTGSEVDVNGGSLI 251


>mll5766 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Mlo Mesorhizobium
           loti
          Length = 250

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 88/141 (62%), Gaps = 2/141 (1%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGP-GALIYAASKGFVSTITRG 59
           + +N R V+  ++A IP MR+ GGG+II ++SV+A+ GGG  G   Y+A+K  V  + + 
Sbjct: 109 LDVNLRGVLYLSQAFIPHMRENGGGSIICMSSVSAQRGGGIFGGPHYSAAKAGVLGLAKA 168

Query: 60  MAKELQPDNIRVNAVAPGVIMTPFQERFTTPEQLESFRKTIPMGRIGDPAECDGAFLYLA 119
           MA+E  PD IR+N V PG+I T       T        K IP+ R+GD  +  GA+L+LA
Sbjct: 169 MAREFGPDGIRINCVTPGLIQTDITGGKLTDAMRADIIKGIPLSRLGDARDVAGAYLFLA 228

Query: 120 SDALSGYVTGQIIDVNGGQYM 140
           SD L+ Y+TG +IDVNGG  +
Sbjct: 229 SD-LASYITGAVIDVNGGMLI 248


>TM1724 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Tma Thermotoga
           maritima
          Length = 246

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 5/138 (3%)

Query: 1   VQINARSVVAFTRAVIPVMRKQGGGNIINVTSVAARHGGGPGALIYAASKGFVSTITRGM 60
           + +N + V   T+ V+P M KQ  G+I+NV+SV   +G  PG   YAASK  V  +T+  
Sbjct: 110 INVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGN-PGQTNYAASKAGVIGMTKTW 168

Query: 61  AKELQPDNIRVNAVAPGVIMTPFQERFTTPEQL-ESFRKTIPMGRIGDPAECDGAFLYLA 119
           AKEL   NIRVNAVAPG I TP  E+   PE+  E+    IP+GR G P E     L+LA
Sbjct: 169 AKELAGRNIRVNAVAPGFIETPMTEKL--PEKARETALSRIPLGRFGKPEEVAQVILFLA 226

Query: 120 SDALSGYVTGQIIDVNGG 137
           SD  S YVTGQ+I ++GG
Sbjct: 227 SDE-SSYVTGQVIGIDGG 243