BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0036.p         (171 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2005 Non COG                                                       147   8e-36

>RSc2005 Non COG
          Length = 403

 Score =  147 bits (372), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 105/171 (61%), Gaps = 5/171 (2%)

Query: 1   LTRFLPGCNVELLLPQPYYFACREADKRIRPAAIRAADHYLTQTLGVASSELHANIGSFC 60
           ++  +PGC  ELLLP  ++ +CRE+DKRIRP  +RAA +YL   L + +    A IG+F 
Sbjct: 238 ISTLMPGCEFELLLPDAFFLSCRESDKRIRPLTVRAAVNYLQGALELPADRFSAIIGAFG 297

Query: 61  ENINGQIDEYRVGFSLGNDDGIVYGIVWPLYEQEDGDEVRDLSAPDSAQTPMEEILGVLR 120
           E     I+EYRV F++  +  ++YGIVWP+Y ++ G    ++S      +P+E+I   LR
Sbjct: 298 EE---SIEEYRVAFTVRGEKDLIYGIVWPVYGRDGG--ATEVSTEGEPGSPLEQICEELR 352

Query: 121 DCGIVQIKLHEERYTMEFCDDCGTPLFPAPDGDLVHAEMPEDAPASTEHFH 171
            CGI  I  H + +  E+C+DCG PL+     ++VHAEMPEDAP     FH
Sbjct: 353 ACGIEDIFRHGQLFEPEYCEDCGAPLYADRTAEIVHAEMPEDAPTQQPLFH 403