BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0058.p         (78 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1339 [E] COG1126 ABC-type polar amino acid transport system, A...   127   6e-30
RSc0484 [E] COG1126 ABC-type polar amino acid transport system, ...   107   7e-24
gltL [E] COG1126 ABC-type polar amino acid transport system, ATP...   106   1e-23
ZgltL [E] COG1126 ABC-type polar amino acid transport system, AT...   106   1e-23
ECs0691 [E] COG1126 ABC-type polar amino acid transport system, ...   106   1e-23

>PA1339 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Pae Pseudomonas aeruginosa
          Length = 244

 Score =  127 bits (319), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/71 (80%), Positives = 61/71 (85%)

Query: 1  MIELNNVSKWYGSFQVLTDCTTSVAKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60
          MI + NVSKWYG FQVLTDC+T VAKG+VVVVCGPSGSGKSTLIK VN LEPFQKG I V
Sbjct: 1  MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 60

Query: 61 DGVSVGDPKTN 71
          DG S+ DPKTN
Sbjct: 61 DGTSIADPKTN 71


>RSc0484 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Rso Ralstonia solanacearum
          Length = 244

 Score =  107 bits (267), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 58/71 (81%), Positives = 60/71 (84%)

Query: 1  MIELNNVSKWYGSFQVLTDCTTSVAKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60
          MIE+ NVSKWYG FQVLTDCTTSV K +VVVVCGPSGSGKSTLIKTVN LEPFQKG I V
Sbjct: 1  MIEIKNVSKWYGQFQVLTDCTTSVKKSEVVVVCGPSGSGKSTLIKTVNALEPFQKGEILV 60

Query: 61 DGVSVGDPKTN 71
          DG SVG   TN
Sbjct: 61 DGTSVGARGTN 71


>gltL [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Eco Escherichia coli K12
          Length = 241

 Score =  106 bits (264), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 61/71 (85%)

Query: 1  MIELNNVSKWYGSFQVLTDCTTSVAKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60
          MI L NVSKWYG FQVLTDC+T V KG+VVVVCGPSGSGKSTLIKTVNGLEP Q+G ITV
Sbjct: 1  MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV 60

Query: 61 DGVSVGDPKTN 71
          DG+ V D KT+
Sbjct: 61 DGIVVNDKKTD 71


>ZgltL [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component EcZ Escherichia coli O157:H7 EDL933
          Length = 241

 Score =  106 bits (264), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 61/71 (85%)

Query: 1  MIELNNVSKWYGSFQVLTDCTTSVAKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60
          MI L NVSKWYG FQVLTDC+T V KG+VVVVCGPSGSGKSTLIKTVNGLEP Q+G ITV
Sbjct: 1  MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV 60

Query: 61 DGVSVGDPKTN 71
          DG+ V D KT+
Sbjct: 61 DGIVVNDKKTD 71


>ECs0691 [E] COG1126 ABC-type polar amino acid transport system, ATPase
          component Ecs Escherichia coli O157:H7
          Length = 241

 Score =  106 bits (264), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/71 (78%), Positives = 61/71 (85%)

Query: 1  MIELNNVSKWYGSFQVLTDCTTSVAKGDVVVVCGPSGSGKSTLIKTVNGLEPFQKGTITV 60
          MI L NVSKWYG FQVLTDC+T V KG+VVVVCGPSGSGKSTLIKTVNGLEP Q+G ITV
Sbjct: 1  MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITV 60

Query: 61 DGVSVGDPKTN 71
          DG+ V D KT+
Sbjct: 61 DGIVVNDKKTD 71