BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0057.p         (169 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0484 [E] COG1126 ABC-type polar amino acid transport system, ...   277   8e-75
PA1339 [E] COG1126 ABC-type polar amino acid transport system, A...   269   2e-72
YPO2612 [E] COG1126 ABC-type polar amino acid transport system, ...   268   6e-72
STM0662 [E] COG1126 ABC-type polar amino acid transport system, ...   267   9e-72
gltL [E] COG1126 ABC-type polar amino acid transport system, ATP...   263   2e-70

>RSc0484 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Rso Ralstonia solanacearum
          Length = 244

 Score =  277 bits (708), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 148/167 (88%), Gaps = 2/167 (1%)

Query: 5   RIGMVFQNFELFPHLSIRENLTIGQVKVLGRSVTEATEKGLKYLDRVGLIAQKDKFPGQL 64
           R+GMVFQNFELFPHLSI ENLTI Q KVLGRS  EA  KGLKYL+RVGL A   K+PGQL
Sbjct: 78  RVGMVFQNFELFPHLSITENLTIAQQKVLGRSKDEAMAKGLKYLERVGLKAHAAKYPGQL 137

Query: 65  SGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVGLAQEGMTMMVVTHEMG 124
           SGGQQQRVAIARALSMDPI MLFDEPTSALDPEM+NEVLDVMV LA+EGMTMM VTHEMG
Sbjct: 138 SGGQQQRVAIARALSMDPICMLFDEPTSALDPEMVNEVLDVMVELAKEGMTMMCVTHEMG 197

Query: 125 FARKVANRVIFMDKGLIVEDCKKEDFFGS--PRSDRARDFLAKIITH 169
           FARKVANRVIFMD+G IVEDC+KE+FFG+   RSDRA+ FL+KI++H
Sbjct: 198 FARKVANRVIFMDQGRIVEDCEKEEFFGNIDNRSDRAKQFLSKILSH 244


>PA1339 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Pae Pseudomonas aeruginosa
          Length = 244

 Score =  269 bits (687), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 131/167 (78%), Positives = 145/167 (86%), Gaps = 2/167 (1%)

Query: 5   RIGMVFQNFELFPHLSIRENLTIGQVKVLGRSVTEATEKGLKYLDRVGLIAQKDKFPGQL 64
           R+GMVFQ+FELFPHLSI ENLTI Q+KVLGRS  EAT+KGL  L+RVGL     K PGQL
Sbjct: 78  RVGMVFQHFELFPHLSITENLTIAQIKVLGRSKEEATKKGLALLERVGLKEHAHKHPGQL 137

Query: 65  SGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVGLAQEGMTMMVVTHEMG 124
           SGGQQQRVAIARAL+MDP+ MLFDEPTSALDPEM+NEVLDVMV LA EGMTMM VTHEMG
Sbjct: 138 SGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMVQLAHEGMTMMCVTHEMG 197

Query: 125 FARKVANRVIFMDKGLIVEDCKKEDFFG--SPRSDRARDFLAKIITH 169
           FARKVANRVIFMD+G IVEDC+KE+FFG  S RS+RA+ FLAKI+ H
Sbjct: 198 FARKVANRVIFMDRGQIVEDCEKEEFFGDVSARSERAQQFLAKILPH 244


>YPO2612 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Ype Yersinia pestis
          Length = 242

 Score =  268 bits (684), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 130/163 (79%), Positives = 143/163 (87%)

Query: 5   RIGMVFQNFELFPHLSIRENLTIGQVKVLGRSVTEATEKGLKYLDRVGLIAQKDKFPGQL 64
           ++GMVFQ+FELFPHLSI ENLT+ Q+KVL R   EA EKGLK L+RVGL    DK+P QL
Sbjct: 79  KVGMVFQHFELFPHLSIIENLTLAQIKVLKRDKAEALEKGLKLLERVGLSTHVDKYPSQL 138

Query: 65  SGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVGLAQEGMTMMVVTHEMG 124
           SGGQQQRVAIARAL MDPIAMLFDEPTSALDPEMINEVLDVMV LA EGMTMMVVTHEMG
Sbjct: 139 SGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVKLALEGMTMMVVTHEMG 198

Query: 125 FARKVANRVIFMDKGLIVEDCKKEDFFGSPRSDRARDFLAKII 167
           FARKVANRVIFMD+G IVED  K+DFF +P+SDRA+DFLAKI+
Sbjct: 199 FARKVANRVIFMDEGKIVEDSDKDDFFNNPKSDRAKDFLAKIL 241


>STM0662 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Sty Salmonella typhimurium LT2
          Length = 241

 Score =  267 bits (682), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 131/163 (80%), Positives = 142/163 (87%)

Query: 5   RIGMVFQNFELFPHLSIRENLTIGQVKVLGRSVTEATEKGLKYLDRVGLIAQKDKFPGQL 64
           R+GMVFQ+FELFPHLSI ENLT+ QVKVL R    A +KGLK L+RVGL A  +KFP QL
Sbjct: 78  RVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAAARDKGLKLLERVGLSAHANKFPAQL 137

Query: 65  SGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVGLAQEGMTMMVVTHEMG 124
           SGGQQQRVAIARAL MDPIAMLFDEPTSALDPEMINEVLDVMV LA EGMTMMVVTHEMG
Sbjct: 138 SGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMG 197

Query: 125 FARKVANRVIFMDKGLIVEDCKKEDFFGSPRSDRARDFLAKII 167
           FARKVANRVIFMD+G IVED  KE+FF +P SDRA+DFLAKI+
Sbjct: 198 FARKVANRVIFMDEGKIVEDSPKEEFFANPSSDRAKDFLAKIL 240


>gltL [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Eco Escherichia coli K12
          Length = 241

 Score =  263 bits (671), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/163 (79%), Positives = 140/163 (85%)

Query: 5   RIGMVFQNFELFPHLSIRENLTIGQVKVLGRSVTEATEKGLKYLDRVGLIAQKDKFPGQL 64
           R+GMVFQ+FELFPHLSI ENLT+ QVKVL R    A EK LK L+RVGL A  +KFP QL
Sbjct: 78  RVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQL 137

Query: 65  SGGQQQRVAIARALSMDPIAMLFDEPTSALDPEMINEVLDVMVGLAQEGMTMMVVTHEMG 124
           SGGQQQRVAIARAL MDPIAMLFDEPTSALDPEMINEVLDVMV LA EGMTMMVVTHEMG
Sbjct: 138 SGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMG 197

Query: 125 FARKVANRVIFMDKGLIVEDCKKEDFFGSPRSDRARDFLAKII 167
           FARKVANRVIFMD+G IVED  K+ FF  P+SDRA+DFLAKI+
Sbjct: 198 FARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKIL 240