BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0050.p         (130 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0491 [J] COG0103 Ribosomal protein S9 Rso Ralstonia solanacearum   218   4e-57
NMB2056 [J] COG0103 Ribosomal protein S9 Nme Neisseria meningiti...   203   7e-53
NMA0379 [J] COG0103 Ribosomal protein S9 NmA Neisseria meningiti...   203   7e-53
rpsI [J] COG0103 Ribosomal protein S9 Eco Escherichia coli K12        181   3e-46
ZrpsI [J] COG0103 Ribosomal protein S9 EcZ Escherichia coli O157...   181   3e-46

>RSc0491 [J] COG0103 Ribosomal protein S9 Rso Ralstonia solanacearum
          Length = 130

 Score =  218 bits (554), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 107/130 (82%), Positives = 116/130 (89%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           MIGN+NYGTGRRKSAVARVFIKSG G I+VNGKP  +YF+RET LM++RQPLELT++   
Sbjct: 1   MIGNWNYGTGRRKSAVARVFIKSGKGDIIVNGKPVADYFARETSLMMVRQPLELTNHGAT 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDI VNV GGGE+GQAGAVRHGITRALIDYDATLKP LSKAG VTRDAREVERKKVGL K
Sbjct: 61  FDIKVNVVGGGETGQAGAVRHGITRALIDYDATLKPTLSKAGLVTRDAREVERKKVGLHK 120

Query: 121 ARRAKQFSKR 130
           ARR KQFSKR
Sbjct: 121 ARRRKQFSKR 130


>NMB2056 [J] COG0103 Ribosomal protein S9 Nme Neisseria meningitidis MC58
          Length = 130

 Score =  203 bits (517), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 98/130 (75%), Positives = 113/130 (86%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           M G Y YGTGRRKS+VARVF+  G+G+I+VNG+P +E+F+RET  MV+RQPL LT N E 
Sbjct: 1   MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETSRMVVRQPLVLTENAES 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDI VNV GGGE+GQ+GA+RHGITRALID+DA LKP LS+AGFVTRDAREVERKK GLRK
Sbjct: 61  FDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAGFVTRDAREVERKKPGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130


>NMA0379 [J] COG0103 Ribosomal protein S9 NmA Neisseria meningitidis Z2491
          Length = 130

 Score =  203 bits (517), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 98/130 (75%), Positives = 113/130 (86%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           M G Y YGTGRRKS+VARVF+  G+G+I+VNG+P +E+F+RET  MV+RQPL LT N E 
Sbjct: 1   MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETSRMVVRQPLVLTENAES 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDI VNV GGGE+GQ+GA+RHGITRALID+DA LKP LS+AGFVTRDAREVERKK GLRK
Sbjct: 61  FDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAGFVTRDAREVERKKPGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130


>rpsI [J] COG0103 Ribosomal protein S9 Eco Escherichia coli K12
          Length = 130

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/130 (68%), Positives = 104/130 (80%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           M  N  YGTGRRKS+ ARVFIK G+GKIV+N +   +YF RET  MV+RQPLEL   VE+
Sbjct: 1   MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
            D+ + V GGG SGQAGA+RHGITRAL++YD +L+ EL KAGFVTRDAR+VERKKVGLRK
Sbjct: 61  LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARR  QFSKR
Sbjct: 121 ARRRPQFSKR 130


>ZrpsI [J] COG0103 Ribosomal protein S9 EcZ Escherichia coli O157:H7
           EDL933
          Length = 130

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/130 (68%), Positives = 104/130 (80%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           M  N  YGTGRRKS+ ARVFIK G+GKIV+N +   +YF RET  MV+RQPLEL   VE+
Sbjct: 1   MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
            D+ + V GGG SGQAGA+RHGITRAL++YD +L+ EL KAGFVTRDAR+VERKKVGLRK
Sbjct: 61  LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARR  QFSKR
Sbjct: 121 ARRRPQFSKR 130