BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0047.p         (234 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0492 Non COG                                                       117   2e-26

>RSc0492 Non COG
          Length = 251

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 147/244 (60%), Gaps = 12/244 (4%)

Query: 1   MSISAPKMTIKRHMPWPLRAVFLAVVVGLGGALAMLAYDLGRNNFAGLNPDGMRDQVVEL 60
           +S+ AP +T++  +PWP+  + +AVVVGL  A A+ A++ GR    G +   +R    EL
Sbjct: 10  VSVLAPNVTVRSRLPWPVTILLIAVVVGLAAAAALWAFEEGRR-LTGPHDADLRAMNREL 68

Query: 61  KEQVKKLSAEREQLSTSANAAESQLNIERSAQAQLAGQIKTLVTENNKLKEDLSFFESLL 120
             ++  + AER++L+ SA  AES+L +   AQ Q+A QIK L  EN +LKEDL+FF+SLL
Sbjct: 69  GVKLATVQAERDKLAASAGTAESRLGMAEGAQQQMAEQIKALEAENAQLKEDLAFFDSLL 128

Query: 121 PTNVGVDGITIQ--RLKAEVVVPNQVRYQLLAIQGEKGR------QFVGNLQLAVTVLQG 172
           P      GI ++  R+  +   P ++R+++L +QG  G+      +F G L L + V+Q 
Sbjct: 129 PAPTNSAGIYVRSFRIAPDEAQPARLRFRVLLMQG-GGKAFAPVSEFEGQLVLTLNVVQA 187

Query: 173 GKSVIINFPEQNATDPARY--KLAFKYYQRVEGVLTLPEGATIKAIQARVLERGQMRAQQ 230
           GK   I+FP   A   A    ++   +YQR+EG + +P G T+K++  +VL+ G+++A Q
Sbjct: 188 GKPATIDFPGAAAGGSAAPATRVKLTHYQRLEGWVDVPPGTTVKSVVVKVLQNGKVKASQ 247

Query: 231 SVNL 234
           S ++
Sbjct: 248 SFSI 251